Pseudoalteromonas sp. MM1: PspMM1_06860
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Entry
PspMM1_06860 CDS
T09926
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03030
DNA replication
psmm03430
Mismatch repair
psmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PspMM1_06860 (holC)
03430 Mismatch repair
PspMM1_06860 (holC)
03440 Homologous recombination
PspMM1_06860 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmm03032
]
PspMM1_06860 (holC)
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_06860 (holC)
Enzymes [BR:
psmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PspMM1_06860 (holC)
DNA replication proteins [BR:
psmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PspMM1_06860 (holC)
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PspMM1_06860 (holC)
BRITE hierarchy
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
BED88218
LinkDB
All DBs
Position
1:complement(784087..784533)
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AA seq
148 aa
AA seq
DB search
MNINAQFFVLKQPDESKAKADDHFALAAQIAAEQYRLGNRVFIFVDNEHTAYAIDETIWA
FDPDSFVPHNLQGEGPKAGAPVEIGTTPPVGKRNVLINLANNLPDFIRRFSQVFDFVPVE
SVAKQAARERFKKLRQLGANISTQEINS
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaatgcccaatttttcgttctaaagcaaccagatgagtctaaagcgaaggct
gatgatcattttgctttagcagctcaaattgccgcagagcagtatcgattagggaatcgt
gtgtttatttttgttgataacgagcacaccgcctatgccattgacgaaaccatttgggca
tttgatcccgacagttttgtgccgcataacctgcaaggcgaaggccctaaagccggcgca
ccagtagaaataggcaccacgcctcctgttggcaaacgtaacgttttaattaacttagct
aataacctgcctgattttattaggcgttttagccaagtttttgattttgtaccagtagag
tctgtagctaagcaagccgctcgtgagcgctttaaaaagctgcgccaacttggtgccaat
atcagcacgcaagagattaatagctag
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