KEGG   Pseudoalteromonas sp. MM1: PspMM1_06860
Entry
PspMM1_06860      CDS       T09926                                 
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
psmm  Pseudoalteromonas sp. MM1
Pathway
psmm03030  DNA replication
psmm03430  Mismatch repair
psmm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psmm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PspMM1_06860 (holC)
   03430 Mismatch repair
    PspMM1_06860 (holC)
   03440 Homologous recombination
    PspMM1_06860 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psmm03032]
    PspMM1_06860 (holC)
   03400 DNA repair and recombination proteins [BR:psmm03400]
    PspMM1_06860 (holC)
Enzymes [BR:psmm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PspMM1_06860 (holC)
DNA replication proteins [BR:psmm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PspMM1_06860 (holC)
DNA repair and recombination proteins [BR:psmm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PspMM1_06860 (holC)
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: BED88218
LinkDB
Position
1:complement(784087..784533)
AA seq 148 aa
MNINAQFFVLKQPDESKAKADDHFALAAQIAAEQYRLGNRVFIFVDNEHTAYAIDETIWA
FDPDSFVPHNLQGEGPKAGAPVEIGTTPPVGKRNVLINLANNLPDFIRRFSQVFDFVPVE
SVAKQAARERFKKLRQLGANISTQEINS
NT seq 447 nt   +upstreamnt  +downstreamnt
atgaacatcaatgcccaatttttcgttctaaagcaaccagatgagtctaaagcgaaggct
gatgatcattttgctttagcagctcaaattgccgcagagcagtatcgattagggaatcgt
gtgtttatttttgttgataacgagcacaccgcctatgccattgacgaaaccatttgggca
tttgatcccgacagttttgtgccgcataacctgcaaggcgaaggccctaaagccggcgca
ccagtagaaataggcaccacgcctcctgttggcaaacgtaacgttttaattaacttagct
aataacctgcctgattttattaggcgttttagccaagtttttgattttgtaccagtagag
tctgtagctaagcaagccgctcgtgagcgctttaaaaagctgcgccaacttggtgccaat
atcagcacgcaagagattaatagctag

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