Pseudopedobacter saltans: Pedsa_0299
Help
Entry
Pedsa_0299 CDS
T01430
Name
(GenBank) glycoside hydrolase family 2 sugar binding protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
psn
Pseudopedobacter saltans
Pathway
psn00052
Galactose metabolism
psn00511
Other glycan degradation
psn00600
Sphingolipid metabolism
psn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Pedsa_0299
09103 Lipid metabolism
00600 Sphingolipid metabolism
Pedsa_0299
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Pedsa_0299
Enzymes [BR:
psn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Pedsa_0299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Malectin
Glyco_hydro_2
Glyco_hydro_2_C
Glyco_hydro_2_N
BetaGal_ABD2
BetaGal_gal-bd
DUF4982
Motif
Other DBs
NCBI-ProteinID:
ADY50883
UniProt:
F0S4C6
LinkDB
All DBs
Position
366514..370026
Genome browser
AA seq
1170 aa
AA seq
DB search
MNLLRSGLTSIFLLISFYLSNATEIRKSISLNNEWRTVADDFDKEKYNDFNQASFNDKDW
KKVNVPHNWDKYAGYRRLLHGNRHGYAWYRKTFKIEDQPNTNKKYFLFFEGVGSYATVWL
NGKQVGYHAGGRTTFTLDISKEILLNNQENILAVRADHPAEIRDLPWVDGGCSSERGFSE
GSQPMGIFRPVQLIVTNDVKVEPFGVHIWNDDQISEKEATLHLTTEIKNYGSKSKKVTIR
QSFLDAKGNSVFQLNHAQNLKGLQQLVVKQQSPKIANPILWDLENPYLYTLKTQILENNQ
VIDEIKTPYGIRWVSWPLGLTPNGGKTFMLNGKTVFLNGIAEYEHLIGNSHAFSDEQVYS
RASQMKSAGFNSFREGHQPHNLRYQEFWDANGVLLWTQLSAHIWFDNPAFKKNFKSLLID
WVKERRNSPSVILWGLQNESTIPEDFARECTELIRSLDPTASKQRLVTTCNGGKGTDWDV
PQNWTGTYGGLPAAYGEDLKRQVLVGEYGAWRTLDLHSEGPHLPNVQDYNEDRFTHIMET
KVRLADSVKNEVAGHYFWLWTSHDNPGRVQGGEGLRELDRVGPVNYKGLLTPWEEPTDAL
YMFKANFASKQKEPMLYIASHTWPERWNSAGVKNNINIYSNCDEVALMNDIDGPVLARQK
NPGLGKHFVFNNVFIKYNVLYAVGYVEGKAVAKDVLVLNNLTRSPNFEALYAFEDSGLIK
PTTGLNYIYRYNCGGGDYTDQFGNVWLADRRKTTSNAYGFSSWTNAFPGIPTFFASQRRT
FDPISNTRDWGLFQEFRYGRDELKFEFEVPDGEYQVELFFIEPWLGTGGGTDASKWRLFD
IAVNDEIKIKNLDIWKEARHDQVLKKVISAKSKDGKLMIHFPNVKAGQALISAIAIATKD
QSVIKARSVFSEFVEENNQIVLKKWADIGNKYSVDRSFSTLTPALFGSEYLVNTAIKENV
SLKLKEKTTVYLAIKKTPFKAYVPQGFDDTKESFKNNIGEQFNVYVKRAEKGEVLNFEKL
DFPNYILFFNEINGLQPAYDLKTATTYKANTLKQGDGIEKIDFLKQDRLIFRKDNAVIEF
EIKVGVADVYSLTFKYHNPFKEVKTASVEVVTLDGMVLMPAELIQLDPTREGKWNYFNTN
TGTMINAGTYKVRLKAIDAKDVYVDGLDVQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattgagaagcggattaacaagcatatttttattaatttctttttacttatct
aatgcaacagagataaggaaatccatttccttaaataatgagtggagaactgttgctgat
gattttgataaagaaaaatacaacgactttaatcaggcatcatttaatgacaaagattgg
aagaaagtaaacgttccgcataattgggataaatacgcaggatacagaaggcttttgcat
ggtaacagacatggttatgcctggtataggaaaacgttcaaaatagaagatcaaccaaac
accaataaaaaatatttcctgttttttgagggagtaggatcttacgccacggtatggtta
aacggtaaacaggtaggttatcatgccggtggcagaacaacttttactttggatatttca
aaggaaattttgttgaataatcaggagaatattttggctgtaagggccgatcatccggcc
gagatcagagatttgccttgggtagatggtggatgttcatcggaaagaggtttttctgaa
ggatcacaaccaatgggtatttttcgtcctgtccaattaatcgtaaccaacgatgtaaag
gttgagccttttggtgtgcatatctggaacgatgaccagatttctgaaaaagaagccacc
ttacatctgactacggaaattaaaaattatggatcgaaatcgaaaaaagtaacgatcagg
cagagctttttagatgccaaaggaaattcggtatttcaactaaatcatgcacagaattta
aaaggattacagcaacttgtcgttaaacaacagtctcctaaaatagcgaatcctatttta
tgggatttggaaaatccatatctgtataccttaaaaacccagattttggaaaataatcag
gtgatagatgagataaaaacaccttacggaattagatgggtaagctggcctctaggattg
actccgaatggaggaaaaacctttatgctgaatgggaaaactgtattcctgaacggaatt
gcagagtacgaacatttaataggaaattctcacgcattttctgacgaacaggtttattcg
agagcttctcaaatgaaatcagcaggttttaattcttttagagaagggcaccagccacat
aatttgcgctaccaggaattttgggatgccaatggcgttttattatggacccagttatcg
gcacatatatggttcgataatccagcgtttaaaaagaattttaaaagtcttttaatagat
tgggtgaaggaaagaagaaacagtccatcagttattttatggggattacagaatgaaagc
actattccggaagattttgccagagaatgtaccgaactgatcagaagtctggatccaacg
gcttctaaacagcgtttagtaactacctgtaacggtggaaaaggaacagactgggacgtt
ccgcaaaactggacgggaacttacggaggtttgcctgctgcctatggcgaagatttgaaa
cgtcaggttttagtgggagaatatggtgcgtggagaactttagatttacattccgaaggt
ccgcatttaccaaatgtacaggattataacgaagaccgttttacacatatcatggaaacc
aaggtgcgtttggctgattcggtgaaaaatgaagtagccggccattatttctggttgtgg
acatctcacgataatccgggacgtgtacaaggcggcgagggtttacgcgagttggataga
gttggtcctgtaaactataaaggtttattaacaccctgggaagaaccgactgatgcattg
tatatgtttaaagcaaactttgcatccaaacaaaaggaacccatgctttatatagcatca
catacctggccagagcgttggaacagtgccggggtaaagaataatatcaatatttattca
aattgtgatgaagtagcattgatgaatgatattgacggaccggttttagccagacaaaaa
aatccgggtttgggaaagcatttcgtatttaataacgtgtttataaaatacaatgtactt
tatgcggttggctatgttgaagggaaagctgtagccaaagatgtgcttgtattaaacaat
ctgacgcgatctccgaatttcgaagcgctttatgcttttgaggacagcggactgattaaa
cccacaacaggtttgaattatatctatagatataattgcggtggcggagattataccgat
cagttcggaaatgtatggctggccgatagaagaaaaacaacttctaatgcctatggattt
tcttcctggacaaatgcttttccgggaattccaactttctttgccagtcagcgaagaact
ttcgacccaatttcgaataccagagattggggattatttcaggaattccgatatggaaga
gacgaattgaaatttgaatttgaggttcctgatggagaatatcaggttgaattgtttttt
atagaaccctggttgggaacaggtggtggtacagatgcctctaaatggagactgtttgac
attgctgtaaacgatgaaataaaaataaaaaatctggatatatggaaagaagctcgccat
gatcaggttttaaagaaagttatttcagcaaaatcgaaagatggaaaacttatgattcat
tttccaaatgtcaaagccggacaagcattgatttcggctattgctattgctaccaaagat
caatctgttattaaggcaagatctgtttttagcgagtttgtggaagagaacaatcagatt
gtactgaaaaaatgggcagacatagggaacaagtacagtgtagatagaagcttctctacg
ttaactccggcattatttggaagtgaatatttagtaaatacagctataaaagaaaatgtc
agcctaaaactgaaagaaaaaacaacggtttatctggcgattaaaaagactccttttaag
gcttatgttcctcaaggttttgatgacaccaaagaatcgtttaaaaacaatataggagaa
cagtttaatgtttatgtaaaacgggcagaaaaaggtgaagtactgaattttgaaaaactt
gattttccaaattatatacttttctttaatgaaataaacgggttacaaccagcatacgat
ttaaaaacggcaaccacctataaggccaatactttaaagcaaggggatggaattgaaaaa
atagattttttaaaacaagacaggctgatttttagaaaagataatgctgttatagaattt
gagataaaagttggtgtggcagacgtttattcgctgacttttaaatatcataatccattt
aaagaagttaaaaccgccagtgttgaagtagtgactttggacggaatggttttaatgccg
gcggaactcattcagttggatccaacgagagaaggaaagtggaattatttcaataccaat
accggaactatgatcaatgcagggacttacaaagttcgtttaaaagctattgatgcaaag
gatgtttatgtggatggtttggatgttcagtag
DBGET
integrated database retrieval system
