Pseudomonas solani: PSm6_20460
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Entry
PSm6_20460 CDS
T09213
Symbol
femI_1
Name
(GenBank) ECF sigma factor FemI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psoa
Pseudomonas solani
Pathway
psoa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSm6_20460 (femI_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoa03021
]
PSm6_20460 (femI_1)
Transcription machinery [BR:
psoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSm6_20460 (femI_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_31
HTH_17
HTH_40
HTH_24
Rv2175c_wHTH
Spo0A_C
HTH_Tnp_4
HTH_11
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
BCD85639
LinkDB
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Position
complement(2282599..2283117)
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AA seq
172 aa
AA seq
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MSTVIPEPSLQQDVHRLYKDHHGWLQGWLRRRLGDRERAADIAQDTFLRLLVTRRLPGSG
EGRSYLAQIARNLVIDQWRRQRIEQAYLDSLAMLPEPETPSLETRAMVIETLLQIDAMLD
SMPAKVREAFMLSQFEGLTYPQIAERLRVSVSSVQKYMIRAIQACYQVLYAE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtccactgtcatccccgagccatcgctgcaacaggatgtgcaccgtctctacaaggac
catcacggctggctgcaaggctggctgcggcggcgcctgggcgaccgtgagcgggcggcc
gacatcgcccaggacacctttctccgcctgctggtgacccggcgcctacccggtagcggc
gagggccgcagctacctggcgcagatcgcccgcaacctggtcatcgaccaatggcggcgc
cagcgcatcgaacaggcctacctcgacagcctggccatgctgccggagccggaaaccccc
tccctggagacccgcgccatggtcatcgagaccctgctgcagatcgacgccatgctcgac
tcgatgccggctaaggtgcgcgaagccttcatgctctcgcagttcgagggcctgacttat
ccacagatcgccgagcgcctgcgggtcagcgtcagctcggtgcagaagtacatgatccgc
gccatccaggcctgctaccaggtgctctacgccgaatga
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