KEGG   Pseudomonas solani: PSm6_20460
Entry
PSm6_20460        CDS       T09213                                 
Symbol
femI_1
Name
(GenBank) ECF sigma factor FemI
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psoa  Pseudomonas solani
Pathway
psoa02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psoa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSm6_20460 (femI_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psoa03021]
    PSm6_20460 (femI_1)
Transcription machinery [BR:psoa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSm6_20460 (femI_1)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_31 HTH_17 HTH_40 HTH_24 Rv2175c_wHTH Spo0A_C HTH_Tnp_4 HTH_11 Fe_dep_repress
Other DBs
NCBI-ProteinID: BCD85639
LinkDB
Position
complement(2282599..2283117)
AA seq 172 aa
MSTVIPEPSLQQDVHRLYKDHHGWLQGWLRRRLGDRERAADIAQDTFLRLLVTRRLPGSG
EGRSYLAQIARNLVIDQWRRQRIEQAYLDSLAMLPEPETPSLETRAMVIETLLQIDAMLD
SMPAKVREAFMLSQFEGLTYPQIAERLRVSVSSVQKYMIRAIQACYQVLYAE
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgtccactgtcatccccgagccatcgctgcaacaggatgtgcaccgtctctacaaggac
catcacggctggctgcaaggctggctgcggcggcgcctgggcgaccgtgagcgggcggcc
gacatcgcccaggacacctttctccgcctgctggtgacccggcgcctacccggtagcggc
gagggccgcagctacctggcgcagatcgcccgcaacctggtcatcgaccaatggcggcgc
cagcgcatcgaacaggcctacctcgacagcctggccatgctgccggagccggaaaccccc
tccctggagacccgcgccatggtcatcgagaccctgctgcagatcgacgccatgctcgac
tcgatgccggctaaggtgcgcgaagccttcatgctctcgcagttcgagggcctgacttat
ccacagatcgccgagcgcctgcgggtcagcgtcagctcggtgcagaagtacatgatccgc
gccatccaggcctgctaccaggtgctctacgccgaatga

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