Phytophthora sojae: PHYSODRAFT_533185
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Entry
PHYSODRAFT_533185 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
psoj
Phytophthora sojae
Pathway
psoj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHYSODRAFT_533185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_533185
Enzymes [BR:
psoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHYSODRAFT_533185
Spliceosome [BR:
psoj03041
]
Complex A
U2 snRNP components
U2 related factors
PHYSODRAFT_533185
Complex B
PHYSODRAFT_533185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
FYVE
FIST
FIST_C
Motif
Other DBs
NCBI-GeneID:
20661834
NCBI-ProteinID:
XP_009538646
JGI:
Physo3_533185
UniProt:
G5AEZ5
LinkDB
All DBs
Position
Unknown
AA seq
2125 aa
AA seq
DB search
MNQDVAVPPAAAAAGAAAAAAAAAANDAAEDKNAAADWSDSADNSNSQDDEFLPQPQGPS
LSYERKIRLHKYAENRARSCLGLLADSSNALWKVHDCKNDIGVYKPSSDWSESVSAKAVV
FANAAFPNVLKTIYDLKTSDKFKLFMRKVLGDMFLDAEVLEDLNGTGVYPSANPPRDARE
MYKQAAIKWWAIKSGTLASKSSDFYVLEYIGIETSGGDIVACYLFQESLAEVGGMPHIQG
NNLERSQFDALICKFERTSSPDYKDDFVTISIAFQRPPPMVSLFRSNPAVEMVTQLARGL
RDLLEDPPELQEISVVKTSAWVKDKERRFCVLCNRRFSPIFRRRHHCRTCGEVICWACSS
TIRVPSISFTHNDTGKQVLSRHQPSIRVCSKCVVSHHRSKSGRELNNQEDFKDWIQRSTE
QQQLAAGGEPGGGVQQLRLPSPSHSQDLSGALEAPLDEKEQVPSSKEERMPRKYPRGSKH
MRRVRRSHSEVSVERATGHGRDNQLSVAKPVATKSKSPGSRGRPTSAGRRGPSQDPVRQS
VPPSHDNQEEAERRSSSMERLPVQNSSSYVHAASAWATNKTEVLAMTGAFQELMTKLGGD
VHFVVVGFSTGFSAEVIVNLLRQLAPGVPYIGGTIARGMCDENAWVSVNRHNDEGLVTLW
GVNDPHGIYSVVHAEYSQSDAHEKTYAAAKTAFARVAGDVDAGEKPAFIATYACPLFVEH
AIDGIREAIHCPIIGGCSSDATRHGEGEVSVSWIQISSSSSSDYTKSVRDGRGDWTEMGI
AFALCFPSVETYVSWFSGYSPVGVNSEYCMGTVTKASNKTIYEIDCKPAAEVYQEWLDVA
SDKSQTELSSIGFPRLGSLHPLGTTIDFVSNQMEIDRSIDANSSSSLCSMQSSDWSKLIN
MTAVITGINEDGSLSTTSSVASGTNVVLMETSAQSLKTAINKMGAQAVESNKFYIHETIG
CLMFLSAGVQALLGHKSMAEMVSCHCFRSRSPSRGRSSRASSRRHGASSSSRRKRSRSRS
PSSASGASRSRSRSRERKRRRASKSSDKHRKKRAKSDRRERRRSPSHSRSRSRSRSRSPR
RSKSKRDKSRRSSRKSSRRSRSRSRSRSQARRRRSESKEEPKEQKDLKLEEADGRAADRE
EKTHAAEVKNDKKEQKSGQSQEKKRPAAAAPPVAVKTGGATLKKFKFSGISLKSGNVQAP
KKKSAPFFNALSGDSKPPLNGENAAKKEQREKQKLLIEEQKKEEKAKFLAEEDAVPKQLA
LWTPVDEEKKGETPEEKKKREELEARQRERVQKVVEEVDPLDAYMAGLVDEAAINQSRAN
PAANVISQSEIEAKGKINIYGTFLPPDAAEQSSVTASTSSSTAEPKAATSEVQETPEERE
AREERELKEFMRAIKEKREQEEKKAADATAASTTQTNGAGPEDEEDPMLKKDDTGRIYQG
FEEDIIGEDSELVDQRSALEILQEQQKKKEIKPVDHSKMNYLAFQKKFYVVPKEIKDLSE
EEVEAQRKESEIKVRGKSCPRPLQKWTQCGFSVRMLQLIKKHGFEEPFAIQKQALPAIMS
GRDVIGIAKTGSGKTLAFLLPMFRHILAQPPLQENEGPIGIIMAPARELAQQIYMETRKF
SKGLGLRATAVYGGSSVSEQIANLKRGSDIVICTPGRMIDILCMSAGKMVSLQRVTYVVL
DEADRMFDMGFEPQITKIMMNIRPDRQTLLFSATFPRSVESLARKVLRKPVEITVGTRST
ASGDITQYVEVREEDDKFMRLLQLLGLWYEKGNILVFVNKQQACDQIFQDLMKAGYPALS
LHGGKDQVDRDYTIDDFKRKVRTVMVATSVAGRGLDVKDLVLVINYHCPNHMEDYVHRVG
RTGRAGRKGTAYTFISPDEEEYSVDLVKALENAKQTVPPELTQLAEAFKEKVKRGEARYH
GSGFKGKGFTFDETERNETQRTADLQKRQYELDNGILVEDNAAADDDDADEPSKENSVAA
TDKPSLPAVAKQLPVDSEAMSAFIKAQKIIQNLDLQYKGNGDGSGENHFVEELEINDYPQ
QARWRVTQKEASDSVAELTGAAVIARGSYIPAGRKPNPSERKLYLAIEGPTQASVIEARR
ELQRILDETTMQVGLGGDKYGKYSL
NT seq
6378 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggacgtggcggtgcccccagcggcggctgcagctggagcagcagcagcagcg
gcggcggcggcggctaatgacgctgcggaagacaagaacgcggccgcggactggagcgac
tcggcggacaactcgaactcgcaggacgacgagttcctgccgcagccgcagggcccgtcg
ctctcgtacgagcgcaagatccggctgcacaagtacgcggagaaccgcgcgcggtcgtgt
ctcggcctactggcggactcgagcaacgcgctgtggaaggtgcacgactgcaagaacgac
atcggcgtgtacaagcccagctccgactggtccgagtccgtctcggccaaggccgtggtg
tttgccaacgcggcgttcccgaacgtgctcaagaccatctacgacctcaagacgtcagac
aagttcaagctcttcatgcgcaaggtgctgggcgacatgttcctggacgcagaggtgctc
gaggacctcaacggcacgggcgtctaccccagcgctaacccaccgcgggacgcgcgcgag
atgtacaagcaggcggccatcaagtggtgggccatcaagtcgggcacactggctagcaag
tcctccgacttctacgtgctggagtacattggtatcgagacgtcgggcggggatatcgtt
gcatgctacttgttccaggaatcgctggcggaagtgggcggcatgccgcacatccagggc
aacaacctggagcggtctcagttcgacgcgctgatctgcaagttcgagcgcacgtcctcg
ccggactacaaggacgactttgtcacgatctccatcgcgttccagcgacctccgcccatg
gttagccttttccgcagcaaccctgcagtggagatggtcacgcagctcgcacggggtctt
cgcgacttgctcgaggacccgccagagctgcaggagatctctgttgtaaagacgtccgct
tgggtgaaagacaaagaacgtcgcttctgcgtgctttgcaatcgccgcttttcgccgatc
ttccggcggcgtcaccactgccggacgtgtggggaagtgatctgctgggcctgcagcagc
accatccgcgtgccctcgatcagcttcacgcacaatgacacaggtaagcaggtgctgtcg
cgccaccaaccgagtatccgcgtgtgcagcaagtgcgtggtgtcccaccatcggtcgaag
agtgggagggagctgaataaccaggaggactttaaggactggatccaacgcagcaccgag
cagcagcagctcgctgcaggcggcgagccgggaggtggagtgcagcagctccgactgccc
agcccttcgcactcccaggacttgtcaggtgctttggaagccccgctcgatgagaaggag
caagttccaagctccaaggaggagcgtatgcctcgtaagtaccctcgcggttccaagcat
atgcgccgggtgcgtcgatctcactccgaagtcagtgtcgagcgcgctaccggccacggc
cgggataaccagctgagtgtggccaagcccgtcgccacaaagagcaagagcccaggtagc
agaggacgtcccaccagtgctggtcgtcgtggtccctcgcaggaccccgtgcggcagtct
gtgccaccaagtcacgacaatcaggaggaagcggaacggagatcaagttcgatggagaga
ctgcccgttcagaacagtagcagctacgttcatgctgcatctgcgtgggctacgaacaag
acagaagttctcgcgatgactggtgcctttcaggaactgatgacaaagctcggaggtgat
gtccatttcgtggttgtcggcttctccacgggttttagcgctgaagtaattgttaacctg
cttcgccagttagctcccggggtgccctacatcggcggtacgatcgctcgtggcatgtgt
gacgagaacgcgtgggtgtctgtgaatcggcacaacgatgaagggcttgtcactctatgg
ggagtgaatgacccccacggaatttactccgttgtccacgccgagtactcgcagagcgac
gcacatgaaaagacgtatgcagcggcgaagactgcatttgcccgtgtagcaggtgacgtg
gatgctggagaaaaaccggcatttatcgctacgtacgcgtgtccgctgtttgtagagcac
gcgattgacggtatccgcgaggcaattcactgtccgattatcggtggatgctcttcagac
gccacaaggcacggtgagggtgaggtatcggtctcttggattcaaatcagcagtagcagt
agttcggactacacgaagagtgttcgtgacgggcgaggtgactggacggaaatgggcatc
gcgtttgcgctgtgcttcccgagtgtggagacgtacgtcagctggtttagcggctacagt
ccggtcggagtaaatagcgaatactgcatgggcacagtcacgaaggcatcgaacaagacg
atctacgagatcgactgcaaaccagcggcggaagtctatcaagagtggcttgatgttgcg
tcagacaagagccagactgagctctcttcaatcgggttccctcggctcggcagcctgcac
ccactgggcactacgatcgacttcgtgtcgaaccaaatggagatcgaccgcagcatcgac
gccaactcttcgtcctcgctctgttcaatgcagtcgagcgattggtccaagcttatcaac
atgacggcggtgatcactggcatcaacgaggatggctcactgagcacgaccagctcagtt
gcctccggcacgaacgttgtgctgatggagacctccgcgcagtcgttgaagaccgccatc
aacaagatgggagcacaagccgtggagagcaacaagttctacatccacgagacgatcggc
tgtctgatgttcctgtcggccggagtgcaagctctgctaggccacaagagcatggccgag
atggtaagttgccactgcttccgcagccgcagcccgagtcgcggccgcagctcgcgcgcg
tcctcccggcgccacggcgcgtcgtcgtcgtcgcgtcgcaagcgctcgaggtcccgctcg
ccgtcgtccgccagcggcgcgtcgcgctccagatcgcgctctcgggagcggaagcgccgc
cgcgcgtccaagtcgagcgacaagcaccgcaagaagcgcgccaagagcgaccggcgggag
cggcgccgctcgccgtcgcactcgcgctcgcgctcgaggtcgcgcagccgctcgcccagg
agatccaagtccaagagggacaagagccgccgcagctcgcgcaagagcagccgccggagc
aggagtaggagtcggagcaggagccaggcgagacgcaggaggtccgagtccaaggaggag
cccaaggagcagaaagatcttaagctagaagaagccgacggacgcgctgccgatagggaa
gagaagacgcacgctgctgaggtgaagaacgacaagaaggagcagaagagtggccagagt
caggagaagaagagacctgcagctgctgctccccctgttgccgtgaagactggaggagct
acgttgaagaagttcaagtttagtggcatctcgttgaagtcgggcaacgttcaggctcct
aagaagaagtccgcgccgttcttcaacgcgttgagcggagatagcaagccgccgcttaat
ggcgagaacgcggcgaagaaggagcagcgtgagaagcagaagctgctgatcgaggagcag
aagaaggaggagaaggccaagttcctggcggaggaggacgcagtgcccaagcagttggct
ctatggacgccggtggatgaagagaagaagggtgaaactcccgaggagaagaagaagaga
gaggagctagaggcgcgccagcgggagcgagtgcagaaggtcgtggaggaagtggacccg
ctggacgcctacatggccggtcttgtggacgaagcggctatcaaccagtcgcgcgcgaac
cctgctgccaacgtgatctcccagtccgagatcgaagccaagggcaagatcaatatttat
ggtacgttcctgcctccggatgccgctgagcagtcgagcgtgaccgcttcaacgtcttcg
tctacggctgaacccaaggccgcaactagcgaggtgcaagagactcctgaagaacgtgaa
gcgcgtgaagagcgcgagctcaaggagtttatgcgagcgattaaggagaaacgagagcag
gaggagaagaaggctgcggatgctactgcagcctctacgactcaaactaacggagctgga
ccagaagatgaagaggacccgatgctgaagaaggatgacacgggacgcatctaccaagga
tttgaagaagatattatcggtgaagactcggaactggtggaccagcgctcagctctggaa
attctgcaagaacagcagaagaagaaggagatcaaaccggtggatcactcgaagatgaat
tatctcgcgttccaaaagaaattctacgtggttccgaaagaaatcaaagacttgtcggag
gaagaggtggaggctcagcgtaaggagtctgaaatcaaggtacgcggaaagagctgcccg
cgcccgctgcaaaagtggacgcaatgtggcttcagcgttcggatgcttcaacttatcaag
aagcatggcttcgaggaaccgttcgctatccaaaagcaggcactgccggcgattatgtct
ggacgtgatgtcatcggcattgccaagacgggttcaggcaagacgttggcgttccttctt
cctatgttccgtcacattctggctcaacccccactccaagagaatgagggaccgattggt
atcatcatggcgcccgctcgagaacttgctcagcaaatttacatggagacccggaagttt
tcgaagggtctaggattgcgcgctacggctgtttatggtggatcctcggtctcagaacag
atcgctaacctgaaacgtggctccgatatcgtgatttgcacgccaggccgcatgatcgat
attttgtgcatgagtgcgggtaaaatggtatcgctccagcgtgttacgtacgtggtgcta
gatgaagctgatcggatgttcgacatgggcttcgagccgcagattacgaagattatgatg
aacattcggccagatcgacagacattattgttctcggcaacttttcctcgctcggtggaa
tctctcgcgcgtaaagtactgcggaaaccagttgaaattaccgtgggcacacgcagcacg
gcgtcaggcgatatcacgcaatatgttgaagtgcgcgaagaggacgacaagttcatgcga
ctccttcaactcttgggtctgtggtatgagaagggaaacattcttgtgtttgtaaacaaa
cagcaagcatgcgaccagatcttccaggacttgatgaaggctggataccctgcgctatcg
ctgcacggtggaaaggatcaagtcgatcgagactacaccatcgatgacttcaaacggaag
gtgcggaccgtgatggtggcgacatctgtcgctggtcggggtcttgacgtgaaggatttg
gttcttgtcatcaattaccattgcccgaatcacatggaagactatgtccatcgcgtggga
cgaaccggacgagctgggcgtaagggtactgcttacaccttcatctctccagatgaggag
gagtactcggtggatctcgtgaaggcgcttgaaaacgctaaacaaactgtcccgcccgag
ctgacgcaactagcggaagcattcaaggagaaggttaagcgcggtgaagcaaggtatcac
ggcagtggctttaagggcaagggcttcacgttcgatgaaacggagcggaacgagacccag
cgcacggcagatcttcaaaaacgccaatatgaattggacaatggcattttggttgaggat
aacgctgccgccgatgatgacgatgcagacgagccgagcaaggagaactctgttgctgcg
actgacaagccatcattgcctgccgtggcaaagcagctacctgtcgacagcgaagcaatg
tccgccttcatcaaagctcagaaaatcatccagaacctcgatctgcagtacaagggtaat
ggcgacggctctggcgagaaccacttcgttgaggagcttgagattaatgactatcctcag
caggcacgctggagagtcactcagaaagaggcaagcgactcggtggcggagctcactggc
gcagcggttattgcgagagggtcgtatattcctgctggccgcaagccgaatccatcggaa
cggaaactttacttggctatcgagggtccaacacaagcttccgttatcgaggccaggcgg
gaactgcaacgcatcctggacgaaactacgatgcaagtcggcctgggtggcgacaaatac
gggaagtacagtttgtaa
DBGET
integrated database retrieval system
