Papaver somniferum (opium poppy): 113287835
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Entry
113287835 CDS
T05758
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113287835
Enzymes [BR:
psom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
113287835
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113287835
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GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
113287835
NCBI-ProteinID:
XP_026392473
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Position
1:complement(57473711..57477773)
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AA seq
639 aa
AA seq
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MTLSSSIPTRYALLALLSASTIYCIWKSRRLLQLKLSPQNPNPNLANTKGKIFFISQTGT
SKALANRLLDLLKLNGLDFDVINPKDYEPEDLPKETLVLIIASTWENGKPPSDGGFLANW
VAESAEDFRVGSLILSGCKFAVFGVGSRSYGENFNVVGRDFSQRFRALGASEILPLCEGD
VDEGDLDDVFDVWNTKLIGVLKGENLNENGGVNGDECGSESEYEDYSDEEEEEEETDIVD
LEDIAGKGPSRNSKAAATVKVVANGEKEMVTPVIRASLQKQGYKIIGSHSGVKICRWTKS
QLRGRGGCYKHAFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWRWKMDDPLEIV
NGALEQHTKMIKQMKGVPGVKSECLAEGLVPRHCALSLVGEPIMYPEINTLVDELHRRRI
STFLVTNAQFPEKIRSLKPITQLYVSVDAASKESMKAVDRPLFGDFWERFLDSLKALIDK
EQRTVYRLTLVKGWNAEEIDAYYDLFAIGKPDFVEIKGVTYCGSSATSKLTMENVPWHAD
VKAFSEALALKSGGLYEVACEHVHSCCVLLARTDKFKVDGQWFTWIDYEKFHDLVASGKP
FTSKDYMAVTPTWAVYGAEEGGFDPDQARFKKERRHKTK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacattgagctcttcaattcccactaggtatgcattacttgctcttctctctgcttca
accatttactgtatttggaaatcaagacgtcttttacagcttaaactttcaccccaaaac
cctaaccctaatctagcaaatacaaaaggtaaaatcttcttcatatcccaaacaggaact
tctaaagctttagctaatcgtctattagatcttcttaaattgaatggtctggattttgat
gtaataaatcctaaagattatgaaccagaagatcttcctaaagaaaccctagttttgatt
attgcatcaacttgggagaatggtaaaccaccatcagatggtgggtttttggctaactgg
gttgctgaaagtgctgaagattttagggtgggatcattgattctttctgggtgtaaattt
gctgtttttggtgttggaagtagatcgtatggtgagaattttaatgttgttgggagggat
ttttctcagaggtttagagcacttggagcttcagagattttgcctttatgtgaaggtgat
gttgatgagggggatttagatgatgtatttgatgtttggaatacgaaacttattggggtc
ttgaaaggggagaacttgaatgaaaatggtggagttaatggtgatgagtgtggtagtgag
agtgagtatgaggattattctgatgaagaagaagaggaggaggaaactgatattgttgat
cttgaggatattgctggtaaaggtccttcaaggaattctaaagcagcagctacagtgaaa
gtagtggccaatggggagaaggaaatggtgactccggttattagagcgagcttgcaaaaa
cagggatataaaattattggttcccacagcggtgttaaaatttgtagatggaccaagtca
caacttcgaggccgtggaggttgctataagcacgcattttatggcatagagtctcacagg
tgcatggaagcgacgcctagtttagcttgtgccaataaatgtgttttctgttggaggcat
cacacgaatccagtggggaaaagctggcgttggaagatggacgatccattagagattgta
aatggtgccttagagcagcacacaaaaatgataaagcaaatgaaaggagtacctggagtt
aaatcagagtgtctggcagaaggtctcgttcctaggcattgtgccttgtcacttgttggt
gaacccatcatgtatccagagattaacacacttgtggatgagcttcaccgaagacggatt
tcaactttccttgtaaccaatgcccagttccctgaaaagatcagatccctgaaacctata
acccagctgtatgtgagtgtagacgctgcatctaaggaaagcatgaaggcagttgatagg
ccactgtttggggacttttgggagcgcttcttggattcactgaaagctcttatagacaaa
gaacaacgaacagtttaccgtcttactctggttaaaggatggaatgcagaagaaatagat
gcttactacgacttgtttgctattgggaagcctgattttgttgaaatcaagggtgttaca
tattgtggctcgtccgccacatcgaagcttacaatggagaatgttccttggcatgctgat
gtgaaagccttttcagaggccttagcactgaaaagtggtgggctatatgaagttgcatgt
gagcatgttcattcctgctgtgtgcttttggcaagaactgacaagtttaaggtcgacggt
caatggttcacatggatagattatgaaaagttccacgacttggttgcttcgggtaagcca
tttaccagcaaagattacatggctgtaacaccaacttgggcagtatatggtgcagaagaa
ggcgggtttgatccagaccaggctagatttaaaaaggaacgccgccacaaaactaagtag
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