Papaver somniferum (opium poppy): 113288631
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Entry
113288631 CDS
T05758
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113288631
Enzymes [BR:
psom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
113288631
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113288631
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Ortholog
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GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
113288631
NCBI-ProteinID:
XP_026393508
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All DBs
Position
6:complement(102040819..102045055)
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AA seq
639 aa
AA seq
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MTLSSSIPARYALLALLSASTIYCIWKSRRLLQLKLSLQNPNPNLANTKGKIFFISQTGT
SKALANRLLDLLKLNGLDFDVINPKDYEPEDLPKETLVLIIASTWENGKPPSDGGFLANW
VAESAEDFRVGSLILSGCKFAVFGVGSRSYGENFNAVGRDFSQRFRALGASEILPLCEGD
VDEGDLDDVFDVWNQKLIGVLKGENLNENGEVNGDECASESEYEDYSDEEEEEEETDIVD
LEDIAGKGPSRNSKAAATVKVAANGEKEMVTPVIRASLQKQGYKIIGSHSGVKICRWTKS
QLRGRGGCYKHAFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWRWKMDDPLEIV
NGALEQHTKMIKQMKGVPGVKSECLAEGLVPRHCALSLVGEPIMYPEINTLVDELHRRRI
STFLVTNAQFPEKIRSLKPITQLYVSVDAASKESMKAVDRPLFGDFWERFLDSLKALIEK
EQRTVYRLTLVKGWNAEEIDAYYDLFAIGKPDFVEIKGVTYCGSSATSKLTMENVPWHAD
VKAFSEALALKSGGLYEVACEHVHSCCVLLARTDKFKVDGQWFTWIDYEKFHDLVASGKP
FTSKDYMAATPTWAVYGAEEGGFDPDQARFKKERRHRTK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacattgagctcttcaattcctgctaggtatgcattgcttgctcttctctctgcttca
accatttactgtatttggaaatcaagacgtcttttacagcttaaactttcactccaaaac
cctaaccctaatctagcaaatacaaaaggtaaaatctttttcatatcccaaacaggaact
tctaaagctttagctaatcgcttattagatcttcttaaattgaatggtttagattttgat
gtaataaatcctaaagattatgaaccagaagatcttcctaaagaaaccctagttttgatt
attgcttcaacttgggagaacggtaaaccaccatcagatggtgggtttttggctaactgg
gttgctgaaagtgctgaagattttagggtaggatcattgattctttctgggtgtaaattt
gctgtgtttggtgttggaagtagatcctatggtgagaattttaatgctgttgggagagat
ttttctcagaggtttagagcacttggagcttcagagattttgcctttgtgtgaaggtgat
gttgatgagggggatttagatgatgtatttgatgtttggaatcagaaacttattggggtc
ttgaaaggggagaatttgaatgaaaatggtgaagttaatggtgatgaatgtgctagtgag
agtgagtatgaggattattctgatgaagaagaagaggaggaggaaactgatattgttgat
cttgaggatattgctggtaaaggtccttcgaggaattctaaagcagcagctacagtgaaa
gtagcggccaatggagagaaggaaatggtgactccagttattagagcgagcttgcaaaaa
cagggatataaaattattggttcccacagcggtgttaaaatttgtagatggaccaagtca
caacttcgaggccgtggaggttgctataagcacgcattttatggcatagagtctcacagg
tgcatggaagcgacacctagtttagcttgtgccaataaatgtgttttctgttggaggcat
cacacgaatcctgtggggaaaagctggcggtggaagatggacgaccctttagagattgta
aatggtgccttagagcagcacacaaaaatgataaagcaaatgaaaggagtacctggagtt
aaatcagagtgtctagcagaaggtctcgttcctaggcattgtgccttgtcacttgttggt
gaacccatcatgtatccagagattaacacacttgtggatgagcttcaccgaagacggatt
tcaactttcctggtaaccaatgcccagttccctgaaaagatcagatccctgaaacctata
actcagctgtatgtgagtgtagatgctgcatctaaggaaagcatgaaggcagttgatagg
ccactgtttggggacttttgggagcgtttcttggattcgttgaaagctctcatagagaaa
gaacaacgaacggtttaccgtcttacattggttaaaggatggaatgcagaagaaatagat
gcttactacgacttgtttgctattgggaagcctgattttgttgaaatcaagggtgttaca
tattgtggctcgtctgccacatcgaagcttacaatggagaatgttccttggcatgctgat
gtgaaagccttttcagaggccttagcactgaaaagtggtgggctgtatgaagtcgcatgt
gagcatgttcattcctgctgtgtgcttttggcaagaactgacaagtttaaggtcgacggt
caatggttcacatggatagattatgaaaagttccacgacttggttgcttcgggtaagcca
tttaccagcaaagattacatggctgcaacaccaacttgggcagtatatggtgcagaagaa
ggcgggtttgatccagaccaggccaggtttaaaaaggaacgccgccacagaactaagtag
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