KEGG   Papaver somniferum (opium poppy): 113303278
Entry
113303278         CDS       T05758                                 
Name
(RefSeq) THO complex subunit 1-like
  KO
K12878  THO complex subunit 1
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03013  Nucleocytoplasmic transport
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113303278
  09122 Translation
   03013 Nucleocytoplasmic transport
    113303278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113303278
   03041 Spliceosome [BR:psom03041]
    113303278
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113303278
Spliceosome [BR:psom03041]
 Complex C
  Other components
   EJC/TREX
    113303278
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113303278
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 113303278
NCBI-ProteinID: XP_026408089
LinkDB
Position
8:142741355..142750425
AA seq 627 aa
MAESTSGIRILLHQHQQDRVPTPISCHAERDRVLEIFRSAILKSGPPADFALETVQEAIK
PQRQTVLVQDENQSLENALRTLLQELVSSAVQSGEEIMQFGQSIDDEESTQGQIPRLLDI
VLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGKLVMLR
TCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDAPKGVS
IDFNFYKTFWSLQEHFCNPASSMVAPVKWHKFSANLTVVLDTFDAQPLTDDDGNANNLDE
EDAAAFSIKYLTSSKLMGLELKDPSFRRHVLVQCLILFDYLKAPGKNDKDGPSESMKEEI
RSCEERVKKLLEMIPPKGKGFLRNIERILEREKNWVWWKRDGCPPFEKPPTEIKPGQVKK
RRKILMGNKELHQLWMWADKNPNALDDPNRIKTPSIMEYWKPLAEDMDPKAGIEAEYHHK
NNRVYCWKGLRFSARQDLEGFSRFNDFGIEGVVPPDLLPLEMRSKYQSKPAERSKRAKKE
EAKDTTPPQEDSQFTNPAAEMDGGGIGGELEDSGVPMDADAVGASQSGAQTPEDNSKQSP
AELGQEAGQSEAEVEMDGDGETDTEAE
NT seq 1884 nt   +upstreamnt  +downstreamnt
atggcggaatcaacttcagggattcgaattcttcttcaccaacaccaacaagaccgagtt
cctactcccatatcttgccacgccgagagagaccgagtcctcgaaatattcagaagtgct
atattgaaatctgggccacctgcagattttgcacttgagacagtgcaagaggctataaaa
cctcagaggcaaactgttttagtccaagatgagaatcagtcattggagaacgcccttcga
acattgcttcaagaattggtgtcatcagcagttcagtctggagaagagatcatgcagttt
gggcagtctattgatgacgaggaaagtacccagggccaaataccacgtcttcttgatatt
gtgctctatctttgtgaaaaaggacacgttgaaggtggtatgatattccagttgttggaa
gatttgacagaaatgtctactatgagagactgcaaagaagtcttcggttatatagaaagt
aaacaagatatattggggaagcaagaactttttggacgaggaaagcttgtgatgttgagg
acatgcaatcagcttcttcgccgtctgtcaaaggcaaatgatgtggttttttgtggacga
attcttatgtttttggcacatttcttcccactgtcagaacgttcagctgtcaatataaag
ggagttttcaatacttccaacgaaacaaaatatgaaaaggatgctcctaagggtgtttct
attgatttcaacttctacaagacattctggagtttgcaggagcatttctgcaaccctgcc
tcctcaatggtagctcctgtaaagtggcataaattttcagcaaatttaacggttgtcttg
gatacttttgatgcgcaaccactgactgacgatgatggaaatgcaaacaatcttgatgaa
gaagatgcagcagctttcagcataaagtatctgacaagcagtaaattgatggggttagag
ctgaaagatccaagttttcgtcgccatgttctcgttcagtgccttatactatttgattac
ctgaaggcccctggtaagaatgataaagatgggccttctgaaagcatgaaagaggaaatt
aggtcttgcgaggagcgtgtaaagaagcttcttgaaatgattccacctaaaggaaaggga
tttcttcggaatattgagcgtatattggagcgagagaagaattgggtttggtggaaacgt
gatggttgtccaccatttgaaaagccacctacagagataaaacccggccaagttaaaaaa
cggagaaagatattaatgggaaataaagaactccatcagctgtggatgtgggcagataaa
aatcctaatgctctggatgatcctaatcgtataaaaaccccttctatcatggagtactgg
aaacccttggccgaggatatggatccaaaggctggaatagaagctgaatatcaccataaa
aataaccgggtttattgctggaaaggacttcgattttcagctcgacaagacttggaaggc
ttttctcggtttaatgacttcggcatagaaggagttgtacctccagaccttttaccttta
gaaatgcgttcaaagtatcaaagtaagcccgccgagaggtctaaacgagctaaaaaggaa
gaagctaaagatactacaccaccacaggaggacagtcagttcacaaaccctgcagcagag
atggatggtggtggaattggtggtgaacttgaggactctggtgtaccaatggatgctgat
gctgttggtgcctcccaaagtggtgcacagactcctgaagataattccaagcaaagtcct
gcagaattaggtcaggaagcaggccaatctgaagcagaagttgaaatggatggtgatggg
gagactgatacagaggcggaatag

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