KEGG   Papaver somniferum (opium poppy): 113314350
Entry
113314350         CDS       T05758                                 
Name
(RefSeq) histone deacetylase 9-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03082  ATP-dependent chromatin remodeling
psom03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    113314350
   03083 Polycomb repressive complex
    113314350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psom03036]
    113314350
Enzymes [BR:psom01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     113314350
Chromosome and associated proteins [BR:psom03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     113314350
   HDAC complexes
    Sin3A-HDAC complex
     113314350
    BRAF-HDAC complex
     113314350
    REST complex
     113314350
    SHIP complex
     113314350
    MiDAC complex
     113314350
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     113314350
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    113314350
  Chromatin remodeling factors
   NuRD complex
    113314350
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 113314350
NCBI-ProteinID: XP_026418932
LinkDB
Position
9:142841989..142845763
AA seq 429 aa
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQDLYLNDLAKYNLGEDCPVFENLFEFCQIYAGGTLDAARRL
NNKLCDIAINWAGGLHHAKKCSASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKEIGEREGKYYAINVPLKDGIDDSSFNRLFKI
IIDKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNIPLLVTGGGGY
TKENVARCWTVETGVLLDAELPNEIPDNDYIKYFGPDYSLKIPHGQIENLNSKSYISTIK
MQVMESLRSIQHAPGVQMHEVPPDFYIPDFDEDGQNPDERVDQHTQDKQIQRDDEYYEGD
NDNDNPDDV
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgcgctccaaggacaggatttcctacttctatgacggagatgtgggcagtgtttatttc
gggccaaatcatccaatgaagccgcatcgtctttgtatgacgcatcatcttgttctgtct
tacgacttgcacaagaaaatggagatctataggcctcacaaggcttatcctgtggagctt
gctcagtttcactcggcagattatgtggagtttttgcatcggattactccggacactcaa
gatttatacttgaatgatttggcaaaatataatcttggcgaagattgcccagtctttgag
aacttgttcgagttctgtcaaatttatgctggtggaacactagatgctgcacgtagactg
aacaataagctgtgtgatattgctataaattgggctggtggtctgcaccatgcaaagaag
tgttcagcatctggcttttgttacattaatgacttagttttggggattctggagcttctc
aaatatcatgcccgggttctgtacattgatatcgatgtgcatcatggcgatggagtggag
gaggcattctatttcactgatagggtgatgaccgttagctttcacaaatatggggatctg
ttctttcctggaacaggtgatgttaaggaaataggagaaagagaagggaagtactatgcg
ataaatgtcccactcaaagatggaatagatgactccagctttaatcgacttttcaagata
attattgataaagtagttgagacatatcagccaggtgctattgtcctccagtgtggggca
gattcacttgccggggatcgcttgggctgcttcaacctctccattgatgggcatgctgaa
tgtgtaaaattcgtgaagaaatttaacatacccctattggttactggaggtggtggatat
acaaaggagaatgtagctcgttgctggactgttgaaactggggttctattggatgcggag
ctccctaatgaaattccagataatgattatatcaaatatttcggtccagattattcattg
aagatcccgcacgggcaaatagaaaacttaaatagcaaatcatatattagtacaatcaaa
atgcaagtgatggaaagcctgcgcagcatccaacatgctccaggtgtgcagatgcatgag
gttccaccggatttttacatcccagattttgacgaagatggacagaatcctgatgagcgg
gtcgatcaacacactcaagacaagcaaattcaacgggatgatgagtattacgaaggtgat
aacgacaatgataacccagatgatgtatga

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