Papaver somniferum (opium poppy): 113314350
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Entry
113314350 CDS
T05758
Name
(RefSeq) histone deacetylase 9-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03082
ATP-dependent chromatin remodeling
psom03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113314350
03083 Polycomb repressive complex
113314350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113314350
Enzymes [BR:
psom01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113314350
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
113314350
HDAC complexes
Sin3A-HDAC complex
113314350
BRAF-HDAC complex
113314350
REST complex
113314350
SHIP complex
113314350
MiDAC complex
113314350
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
113314350
Heterochromatin formation proteins
Other heterochromatin formation proteins
113314350
Chromatin remodeling factors
NuRD complex
113314350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
113314350
NCBI-ProteinID:
XP_026418932
LinkDB
All DBs
Position
9:142841989..142845763
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AA seq
429 aa
AA seq
DB search
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQDLYLNDLAKYNLGEDCPVFENLFEFCQIYAGGTLDAARRL
NNKLCDIAINWAGGLHHAKKCSASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKEIGEREGKYYAINVPLKDGIDDSSFNRLFKI
IIDKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNIPLLVTGGGGY
TKENVARCWTVETGVLLDAELPNEIPDNDYIKYFGPDYSLKIPHGQIENLNSKSYISTIK
MQVMESLRSIQHAPGVQMHEVPPDFYIPDFDEDGQNPDERVDQHTQDKQIQRDDEYYEGD
NDNDNPDDV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccaaggacaggatttcctacttctatgacggagatgtgggcagtgtttatttc
gggccaaatcatccaatgaagccgcatcgtctttgtatgacgcatcatcttgttctgtct
tacgacttgcacaagaaaatggagatctataggcctcacaaggcttatcctgtggagctt
gctcagtttcactcggcagattatgtggagtttttgcatcggattactccggacactcaa
gatttatacttgaatgatttggcaaaatataatcttggcgaagattgcccagtctttgag
aacttgttcgagttctgtcaaatttatgctggtggaacactagatgctgcacgtagactg
aacaataagctgtgtgatattgctataaattgggctggtggtctgcaccatgcaaagaag
tgttcagcatctggcttttgttacattaatgacttagttttggggattctggagcttctc
aaatatcatgcccgggttctgtacattgatatcgatgtgcatcatggcgatggagtggag
gaggcattctatttcactgatagggtgatgaccgttagctttcacaaatatggggatctg
ttctttcctggaacaggtgatgttaaggaaataggagaaagagaagggaagtactatgcg
ataaatgtcccactcaaagatggaatagatgactccagctttaatcgacttttcaagata
attattgataaagtagttgagacatatcagccaggtgctattgtcctccagtgtggggca
gattcacttgccggggatcgcttgggctgcttcaacctctccattgatgggcatgctgaa
tgtgtaaaattcgtgaagaaatttaacatacccctattggttactggaggtggtggatat
acaaaggagaatgtagctcgttgctggactgttgaaactggggttctattggatgcggag
ctccctaatgaaattccagataatgattatatcaaatatttcggtccagattattcattg
aagatcccgcacgggcaaatagaaaacttaaatagcaaatcatatattagtacaatcaaa
atgcaagtgatggaaagcctgcgcagcatccaacatgctccaggtgtgcagatgcatgag
gttccaccggatttttacatcccagattttgacgaagatggacagaatcctgatgagcgg
gtcgatcaacacactcaagacaagcaaattcaacgggatgatgagtattacgaaggtgat
aacgacaatgataacccagatgatgtatga
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integrated database retrieval system