Papaver somniferum (opium poppy): 113322431
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Entry
113322431 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113322431
03036 Chromosome and associated proteins [BR:
psom03036
]
113322431
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113322431
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
113322431
SLIK complex
113322431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Allexi_40kDa
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
113322431
NCBI-ProteinID:
XP_026426293
LinkDB
All DBs
Position
11:41220376..41236238
Genome browser
AA seq
1737 aa
AA seq
DB search
MALFRNYSNGMSSQNDYNERSEDCYVEPAHVSVGNEDAGTSSSGSDQDVELNIDDRSGSE
GEQDVGSRIEDETTSMRIENSRPSETRTAQVGKWGSSFWKDCQPLGPQERSEAARDSKNM
GSNCRSEDGFDNYDLNDEEDRLQTEDYDAQAEADELQRSQADVPAEEMLSDDYYEQDGEE
PSDSMHYRGMNRSTASSSKPQSGSTSVNNNMPRGSKAAKVKQYGDEDDDYEDEDDDDEED
EDDPDDVDFEPDFGGLTNSHTRNKDKGWDDDGSDEDDDHDDELISDEDDLDYNGKSRRKG
QNKGGCSRKGRENKSVSANTRPKRKKTFWEAEDSSAKESDSDSGDDFKTNKGRAAANFRK
AGGGRSTVSANARSQNGEVRSSNRSTRKVSYAESEESEEIEDGNAKKAGLKEDIEEEDSD
YIERVLWHQPKGMAEDALNSNKSTQPSVLSHLLDSEPDWNETEFFIKWKGQSYLHCQWKS
FSELQNLSGFKKVVNYTKRVKEERRYRINLSREEVEVHDVGKEMELDLIKQYSQVERIFA
DRIKGGSDDVTPEYLVKWQGLSYAEATWERDIDIAFAQDVIDEYKAREAAMTVQGKMVDF
QRKKSRDSLRKLDEQPDWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSV
SMLGFLQNAQQIHGPFLVVVPLSTMSNWAKEFKKWLPEMNVVVYVGNRASREVCEQHEFY
TNNKSGRSIKFNALLTTYEVVLKDKAVLTKIKWSYLMVDEAHRLKNSEASLYITLSEFST
KNKLLITGTPLQNSVEELWALLHFLDPVKFKSKDEFSEKYKNLSSFNELELANLHKELRP
HILRRVIKDVEKSLPPKFERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIV
VELKKCCNHPFLFESADHGYGGNTSINESSKLERTILSSGKLVILDKLLVRLRETKHRVL
IFSQMVRMLDILADYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSYDFCFLLSTRAGG
LGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEEDILERAKK
KMVLDHLVIQKLNAEGRLEKKETKKGGSLFDKNELSAILRFGAEELFKEDNNDEENKKRL
LSMDIDEILARAEKVESKAAEAEEGGELLSAFKVANFGSTEDDGTFWSRWIQPEAVDQAE
DALAPRAARNTKSYAEANQPDKSTKRKGREVESNSRVPKRRKGDIAVNTPPMIDGAVAQV
RAWSYGNISKKDAGLFVRAVKKFGNQNQISLIVAEVGGAIGAAPSRAQVELFEALIDGCK
EATKGGSFDTKGTLLDFFGVAVKANELLDRVKELQLLAKRIKRYQDPVAQFRLLMHFRDP
QWSKGCGWNQIDDARLLLGVHYHGFGNWEKIRLDSKLGLTWKIAPVELAQRETFLPRAPN
LDQRASALLRKEFAAAGGKSATKPSQKAAKNEGDNMLKISNARFKDMKSKPSKRNVRANK
EPVLKQAAVEPAVKEEGEMSDTELYQQFKEENWMEWCADVMIDVERTLKRLEKLQHTSAN
LPKEKVLSRIRSYLQLVGRKVDEIVQQHELNKQSRMITRLWNYVSTFSNLSGEKLQQIYS
KLKEEQQSEAGVGPSYLNGSAPDHYPNDRDNSSMQYPPYGQNIPNPKRFQKHPPHRASES
FHRDQESAKSEAWKRRRRNDGDLHSPYKQPPLENIRSREPSAAPGILGWGPSDNRHK
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggccttgttcaggaattattctaatggaatgagttcacagaacgattataatgaaaga
agcgaggactgctatgttgagccagctcatgtttcagtagggaatgaagatgctggtaca
agttctagtggcagtgaccaggatgttgaactaaatatagatgatcggtccgggagcgag
ggcgagcaagatgttggaagtaggatagaagatgagacaacttctatgagaatagaaaac
tctcggccgtctgaaacgagaacagctcaggttgggaaatggggttcctcgttttggaag
gactgtcaacctctgggccctcaggaacgatctgaagctgcaagagattcgaagaacatg
ggttctaattgtagaagcgaggatggatttgataactatgatttgaatgatgaggaagat
aggctacagacagaagattacgatgcacaggctgaagcggatgagctccaaaggagccag
gctgatgtgcctgcagaagaaatgctgtctgatgattattatgagcaggatggggaagag
ccaagcgattctatgcattatagaggaatgaatcggtcgaccgcttctagttcaaagcct
cagtctggatctacctctgttaataacaacatgcctaggggttctaaggctgctaaggtc
aagcaatatggcgacgaagatgatgattatgaagatgaagatgatgatgacgaggaagat
gaagatgatcctgatgatgtagattttgagcccgattttggtgggctgacgaacagccac
acgaggaataaggataagggatgggatgatgatggttctgacgaggatgacgatcatgat
gatgaacttatctcagatgaagatgatttggattataatgggaaatctcggcgtaaagga
cagaataaaggtggctgcagtagaaaaggcagagaaaataaatcagtctccgcaaatact
cgtccaaagagaaagaaaaccttttgggaagctgaggattcatctgcaaaggagtctgat
agtgatagtggtgatgactttaaaaccaataaggggagggcagctgccaattttcgcaag
gccggtggtggtcgatcaaccgtgtcggcaaatgccagaagccaaaatggtgaggttcgc
agttcaaatcggtcaacacggaaggtatcgtatgctgaaagcgaagaaagtgaagaaata
gaggatggaaatgcaaaaaaggctggcctaaaggaagatattgaagaggaagacagtgat
tatattgaaagggtactgtggcatcaaccgaagggaatggctgaagatgctttaaatagc
aataagtctacccagccatctgtattgagccacttgttggactctgaaccagattggaat
gaaacagaattctttataaaatggaaggggcagtcttatttacactgccagtggaaatca
ttttcagagctccaaaatcttagtgggttcaaaaaggtcgtgaactacaccaaaagagtg
aaggaggaaaggagatatagaataaatctgtctcgagaagaggtcgaggttcatgatgtg
ggcaaggaaatggagttagatcttatcaagcaatacagtcaggttgaacggatatttgct
gatagaatcaaaggtggttcagatgatgtgactccagagtatctggtcaagtggcaggga
ctatcctatgctgaagcgacctgggaaagggacatagatattgcttttgctcaggatgtc
attgatgagtacaaggccagggaggctgcaatgaccgtccaaggaaaaatggtggatttc
cagaggaaaaaaagcagagatagtcttaggaagctggatgaacaacctgactggctgaaa
ggaggaaaacttcgcgattatcagcttgaggggttgaattttcttgttaatagttggaga
aatgatacaaatgttattctggctgatgaaatggggcttggtaaaactgttcagtctgtc
tcaatgctaggatttctacagaatgcgcaacaaattcatggtccatttcttgtcgttgta
ccgttgtcaactatgtctaactgggcaaaagaatttaagaagtggcttcctgaaatgaac
gttgttgtatatgttggaaatcgtgctagtcgagaggtttgtgagcagcatgaattttac
acaaataacaaaagcggcaggagtatcaaattcaatgctcttttgacaacatatgaagta
gttttgaaggacaaagctgtattgaccaaaattaagtggagctaccttatggttgatgag
gcacacaggctgaaaaatagtgaagcttctctttatataacattatcggaatttagcacc
aagaacaagttactgatcaccggtactcctttacaaaacagtgtcgaagaactatgggcc
ttgcttcatttccttgaccctgtgaagttcaagagcaaggatgagttttccgagaagtac
aagaacctgagctcttttaatgaacttgagcttgcaaatctgcataaggaactgaggccg
cacattctgcgaagagttattaaggatgttgagaagtccttgcctccaaaattcgaacgt
attcttcgggttgaaatgtcccctcttcagaagcagtattataagtggattttggaacgt
aactttcatgatttgaacaaaggagtccgtggaaatcaggtttctctgttaaacattgtg
gtcgagttgaagaagtgttgcaatcatccttttctgtttgaaagtgctgatcatggatat
ggtgggaacacaagcattaatgaaagcagcaaacttgagcggaccattttaagcagtggg
aaattggtaatacttgacaagttgttagtacgcttgcgtgagacgaaacatcgtgtttta
atattttctcagatggttaggatgttggatatactagcagactatttatcacttagagga
tttcaatttcaacgacttgatggtagtactagggcggaccttcgtcatcaggcaatggaa
cattttaatgctcccggaagttatgatttttgcttccttctgtcaactcgtgctggtggt
cttggcatcaatcttgctactgcagatactgtaataatatttgattcagactggaatccc
caaaatgatttacaggctatgagtagagctcatagaattggtcaacgagaagttgtaaat
atttaccggtttgtgaccagtaaaagcgtcgaggaagatattctggaacgtgctaagaag
aaaatggttcttgatcatctggtcattcaaaaactaaatgcagaaggtagacttgagaag
aaagaaacaaagaaaggaggttctttgtttgataaaaatgaactctcagctatcttaagg
tttggagcagaggaactatttaaggaagacaacaatgacgaagaaaacaagaaaagactt
cttagtatggatattgacgagattcttgcaagagcagagaaggttgaatctaaagcagct
gaagcggaagaagggggggagttattaagcgcttttaaggttgcgaacttcggtagtact
gaggatgacggaactttctggagccgttggattcaaccggaagctgttgatcaggcagag
gatgctctagctcctcgtgctgcaaggaataccaagagttatgcggaggctaatcaacca
gataaaagtacaaaaaggaaaggtagagaagttgaatctaatagtagagttccaaagcgc
aggaaaggagatattgctgtaaacactccacctatgattgacggggcagtagctcaagtg
agggcatggtcatatgggaacatttcaaagaaggatgctggcctttttgtccgtgcggtt
aagaagtttgggaatcagaaccaaatcagcctaatagttgccgaggtcggtggtgctatt
ggagcagctccttctcgtgcacaggttgagctgtttgaagctttaattgatggttgtaaa
gaagcgacaaaaggaggaagctttgataccaaggggacgcttctggatttctttggtgtt
gctgtaaaagcgaacgaattgctagatcgtgtaaaagaacttcagctcctagcaaagcgc
attaaacgatatcaagatccagttgcgcaattccgactgctaatgcattttagagatcca
caatggtctaaagggtgcggttggaatcaaattgatgacgcaaggttgcttcttggtgta
cactaccatggctttgggaactgggaaaagattagattagactcaaagcttggtcttact
tggaaaattgccccagtagaacttgcacaacgtgaaacctttttaccacgtgctcctaat
ttggatcaacgtgcttctgcacttctgcgtaaggaatttgcagcagctggtggtaaaagt
gcaacgaaaccaagtcagaaggccgccaaaaatgagggtgataacatgctcaaaatctca
aatgctcgctttaaggatatgaaatctaaacctagtaagcgaaatgtccgagcaaacaaa
gagccagtgctaaaacaggcggctgttgaacctgctgtcaaagaggagggtgaaatgtca
gatactgaactgtatcagcaatttaaggaagaaaattggatggaatggtgtgcagatgta
atgattgatgtggagagaaccctcaaacgcttggagaagttgcagcatacaagtgcaaat
ctaccgaaggaaaaggtgctttccaggattcggagttatctacaacttgttgggagaaag
gtagacgagattgttcagcagcacgaattgaacaagcaatctaggatgataacaagacta
tggaactatgtttccaccttttcaaacctatctggggagaagcttcagcagatatattct
aaacttaaggaggagcagcagtctgaggcaggtgtgggaccatcctacctaaatggatct
gcacctgatcactacccaaacgatagagataatagttccatgcagtatcctccgtacggc
cagaatattccaaatccaaaaaggtttcagaagcatccacctcaccgcgcttcagaatca
tttcatcgagaccaggaaagtgcgaagtcagaagcatggaagcgaagaagaagaaatgat
ggagatttgcattctccctataaacaacctccattggaaaacattaggtcaagggaacca
agtgccgctccaggaattctcggttggggtccatcagataacagacataagtga
DBGET
integrated database retrieval system
