Papaver somniferum (opium poppy): 113346422
Help
Entry
113346422 CDS
T05758
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113346422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113346422
03036 Chromosome and associated proteins [BR:
psom03036
]
113346422
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113346422
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113346422
PBAF complex
113346422
GBAF(ncBAF) complex
113346422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Pox_Ag35
DUF4746
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
113346422
NCBI-ProteinID:
XP_026445741
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MSAQLSFPSGGNNNSKWKKRKRDNTTTTNNSTPNTKKHRQQQQSDDEDEEDINEDDEEEI
EPEIEEDEDLQPIPSVTPPIVQNPKEEVLSDGGVIISDFPIVVQHTVNRFHSSVLSIVSA
ERQAEFPNNQNPNPNFFLIENISHGQLQALSSVPADNHSLATTSDLNDRSDAAASYVCTP
PAIMEGPGVVKRFDGRALVVPMHADWFAPNTVHRLERQVVPFFFSGKSADHTPEKYMECR
NRVVAKYMENPETRLWTGDCQNLVDSVDVHDLNRIVRFLDHWGIINYSAPAPNRDPRIGG
PFLREESNGEIHIPSSALRSIYSLIHFDKPKSRIRPTDMCPMLSYGGGDEVADLEQRIRE
RLTENHCHYCSQPLPRVYYQSQKESDILLCSDCFHEGRFVVGHSSIDFMKVDSAKALCDL
DGDSWTDQETLLLLEAVEVYHDNWNDIAEHVGTKSKAQCILHFVRLPMEDVVLENIDVPS
KLVSSNTANLEDGGTPYPRSNGDSARLCLQDPDSESKLPFANSRNPVMALVAFLASAVGP
RVAAACAHASLAELSKEENQLVASGNKIQTDGSGDRISTENIWSREGGHHGSPTSLSHQK
ENHAAQDGINALSSAPLSAQSVKVAAKVGLAAAAMKAKLFADHEEREIQRMAASIINHQL
KRLELKLKQFAEVETLLMKEGEQVEKARQRLAAERVHIISTRFAPGGALNANTATLQGAV
AGSVGNNLVNSSRQVGMPGGLPVQTNMIPGGYGNNSGVATHPHMSFMPRRPMFSYGPRLP
LSAIHPSSSQPSSAAHPGNTMYNAAAPPGNAPPTLGHAMLRPVPGNNTNVG
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcaactctccttcccttcaggaggaaacaacaacagcaaatggaaaaagaga
aaaagagacaacaccaccaccaccaacaacagcactcctaacaccaagaaacacagacaa
cagcaacaatcagacgatgaagatgaagaagacatcaacgaagacgatgaagaagaaatt
gaaccagaaatcgaagaagatgaagatttacaaccaattccttctgtaacaccaccaatt
gttcaaaacccaaaagaagaggttctttcagatgggggtgtaataatatcagatttccct
attgttgtacaacatactgtaaatcgttttcattcttctgttctttcaattgtttctgct
gagcgtcaagctgaatttcccaataaccaaaaccctaaccctaatttcttcttgattgag
aatatatctcatgggcaacttcaggctttgtcatctgttccagctgataatcattcttta
gctactacatctgatcttaatgaccgatctgatgctgctgcttcctatgtttgcacacct
cctgctattatggaaggtccaggtgttgttaagcgattcgatgggcgagcacttgtcgtc
cctatgcacgctgattggtttgcaccaaacacggtgcacagattggaaaggcaagtggtt
ccgttttttttctctggaaaatctgctgatcatacaccggaaaagtacatggaatgccgc
aatcgagttgttgctaaatatatggagaatccagagacgagactttggacaggagattgc
caaaatttggtcgatagtgttgatgttcacgacttgaatcgaattgttcgatttctagat
cattggggaataattaattacagtgcaccggcaccaaatcgtgaccctaggattggtggg
ccatttttaagggaggaatcgaatggggaaattcacattccatcgtctgcattgaggtca
atttatagtttgattcactttgacaagcctaagagtaggatcagacctactgatatgtgc
cctatgttgtcgtatggtggcggtgatgaggtagccgacttggaacagagaatccgggag
aggttaacagaaaaccattgccattactgctctcagccattgcctcgtgtttactatcag
tcacagaaggaaagtgatatactgctttgctctgactgcttccatgaagggagatttgtc
gttgggcactcgagcatagattttatgaaggtggattctgcaaaagctttatgtgatctt
gatggggatagttggactgaccaggaaacactattgttgcttgaggcagtcgaggtctac
catgataattggaatgacattgcagagcatgtaggcaccaagtccaaggcccagtgcatt
cttcattttgttcgtctcccgatggaggatgttgttttagaaaatattgatgttccgagt
aagttggtctcatccaacacggcaaatttagaagatgggggaacaccatatccaaggtct
aatggagattctgcaagactttgtctccaagatcctgattctgaaagcaagcttccattt
gcaaattctaggaatccagtcatggcccttgttgcctttctggcctctgcagtagggcca
agagttgccgcagcctgtgcacatgcatcattagcagaattgtccaaggaggaaaaccag
ctagttgcttctggtaacaagatacaaacagatggctctggagataggataagtacagag
aatatttggagtagagaaggtggacatcatggatcacccacaagcttaagccaccaaaaa
gaaaaccatgctgcacaagatggaattaatgctctttcctctgctcctttgtccgctcaa
agtgtaaaagttgctgcaaaagttggcttagctgcagctgcaatgaaagcaaaactgttt
gcagatcatgaggagcgcgaaatacagagaatggcagccagtataattaatcatcagcta
aagaggctcgaactgaagctgaagcagtttgcggaagtggagaccttgctgatgaaagaa
ggcgagcaagtagaaaaggcaaggcagcggctagcagctgaaagagtccatatcatatca
acgcgttttgcacctgggggtgccttgaatgccaatactgctactttacagggtgcagtg
gctggttctgtgggaaataatcttgttaacagcagcagacaagtaggtatgccaggtggt
ttgcctgtgcagacaaacatgattcctggaggatatgggaacaattcaggggtggctaca
catccacacatgtcattcatgccgagacggcctatgttttcttatgggccacgcttacct
ctctctgcaatacatccatcatcatcacaaccctcatctgctgcacacccaggtaatacc
atgtacaatgctgccgccccgccaggcaatgcaccccctactcttggccatgcaatgtta
agacctgtccctggtaataatacaaatgtaggttga
DBGET
integrated database retrieval system
