Papaver somniferum (opium poppy): 113349677
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Entry
113349677 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113349677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113349677
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113349677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
113349677
NCBI-ProteinID:
XP_026449474
LinkDB
All DBs
Position
2:complement(165800915..165807951)
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AA seq
323 aa
AA seq
DB search
MTGRSSRTLYVGNLPGDIREREVEDLFYKYGPIIDIDLKVPPRPPGYAFVEVDPIPRAVA
NYMGALGEVRETGSSFEDARDAEDAIRGRDGYSFDGHRLRVELAHGGRGQSSSIDRHSSY
SSGGGRGGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVYREGSVSSTIGVVD
YTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRRSLSRSRSRSSSLRSRSRSYSRSK
SRSKSPRTKSSRYSVSRSRSRSVSSDSRSASVSRSPSRSRSPLPARRVRSSKKRTPSRSR
SLSQSLSPVVRSDRSRSVDSRGR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgactggtcgttcaagtcgaactctgtatgttggtaatctcccaggagatatccgtgag
agggaagtggaagatttgttttacaagtatggtccaatcatcgatattgatctaaaggtt
ccaccaaggcccccaggttatgcctttgtcgaggtggatcccatacccagggccgtagca
aactatatgggggctctaggcgaagttagagaaacggggtcctcttttgaagacgctcgc
gatgctgaggatgctatccgtggtcgggatgggtatagcttcgatgggcatcgtttgcgg
gtggaacttgcacatggtgggcgagggcagtcgtcatcaatagatcgtcatagcagttac
agtagcggcggtggtcgtggtggagtatccaggcgctcagactaccgtgtgttggtcact
ggattaccttcttctgcttcatggcaagacctaaaggatcacatgcgccgagccggggat
gtctgtttctcgcaagtgtatcgtgaaggcagtgtctcaagtactatcggtgttgttgat
tacacaaactatgatgacatgaaatatgcgatacgaaagcttgacgactccgagtttcgc
aatgcattttctcgggcttatgtgcgggtgaaggagtatgactcaaggcggagtttatcc
cggagcaggagtcggagttcatctttgaggagcagaagccgcagctacagtcggagcaag
agccggagcaagtctccaaggaccaaatcttctcgctattccgtgtctagatctcgatcc
agatctgtatcttcagattctcgttcagcctctgtgtccagatccccatcaagatcaaga
tctccattaccagctagacgtgtgagaagttcgaaaaaacgaactcccagccgaagcagg
agcttatcccagtctctttcacctgtggtgagatctgatcgcagccgttctgttgactcc
agaggccggtag
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