Papaver somniferum (opium poppy): 113356892
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Entry
113356892 CDS
T05758
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113356892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113356892
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
RNases
113356892
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF5617
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
113356892
NCBI-ProteinID:
XP_026455910
LinkDB
All DBs
Position
3:96530853..96535868
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AA seq
571 aa
AA seq
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MEKIRKILALAEKEVLIDIVKNVQKRKMKGAKGEWKEFLVEYDSQLGDSLLDPNKRPPAC
LVAFLNTFTKEQDLEFFEKIMTYHSNRKAIEQLNKSCIDVQSSPQKLASLTFEHPEYPKC
FSFPSYDEDWVMTKIGKVSKAIKSTRMLSVDCEMVLCEDKTESLVQVCVVNRNLEVKLNE
LVKLDKPVLDYRTQIHGINAKDLERATCSLEDIQKSMKKLLSDGVVLIGHSLDKDLKALK
VDHSRVIDTSLIFKYPEGHTHKRPSLNHLCKTVLGYDLRESGAPHNCLADAQAAMKLVLA
KLENKFDVVIPLKIKEVLESDGVIPLKRKKVLESDGVVPLKTKDVLESDGFVPMKSKDVF
EIESVELFFHEVPIAVPQKQLRRLFPEDSTVKLQASLTGDAYNSSAVFKDSMEACNAFES
FKGEEGKDSSGVPQKLISLDIKYGKRAGSVSFYVHKVLKKVSSDKNPADEGSIQFEETKE
QNKKPIKNSDQRDQVKEIQRLKKDLSDRSPADKRSIQVEETKDQNKKQKKHSDQCDHDEE
IQRLKKEIKGRESELTKAHNIMADLIKKRGL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggagaagattcggaaaattttagcattagcagagaaggaggtgcttattgacattgtg
aaaaatgtacaaaagagaaaaatgaagggtgcaaaaggagaatggaaggaatttttagta
gagtatgattcacaattaggcgacagtttattggatcctaataaaaggccacctgcttgc
ttggttgcatttttgaatacgtttacgaaagagcaagatttagagttttttgaaaaaata
atgacgtaccattctaatcgtaaagcaattgagcaactgaataagagctgtattgatgtt
caatcctctcctcagaagctggcaagcttaacatttgaacaccccgaatatccaaagtgt
ttttcattcccatcttatgatgaggactgggtaatgacgaagataggtaaagtttctaaa
gcaattaagtccaccagaatgctttctgttgattgtgaaatggttctttgtgaagataaa
acagaatctctagtacaagtgtgtgttgtgaatcgaaatttagaggttaagctcaatgaa
cttgtaaaactcgataaacctgttttagattatagaacccagattcatggaatcaatgct
aaggatttggaaagagctacttgttcgttagaagatatacagaaatcaatgaaaaaactg
ttatccgatggagtcgttttaattggccacagtttggataaggatctaaaagcattgaaa
gtggatcattcgagggtgatcgacacatcattaatttttaaatatcctgaagggcatact
cacaagaggccttcgttgaatcatctctgcaagactgtgcttggttatgatcttagggaa
agtggtgctcctcataattgtctagccgatgcacaggctgcaatgaaattagttcttgcc
aagctggaaaataaatttgatgtagtcattcccttgaaaatcaaagaggtgctcgagagt
gatggagtcattcccttgaaaagaaaaaaggtgcttgagagtgatggagtcgttcccttg
aaaaccaaagatgtgctcgagagtgatggattcgttcccatgaaaagcaaagatgtgttc
gagattgaatcggtagagcttttctttcatgaggtacctatagcggttccccagaaacaa
ttgagaagactatttcccgaggactctactgtcaaacttcaggcgagcttgaccggtgat
gcttataattcttctgctgttttcaaagattcaatggaggcatgtaatgcatttgaaagt
ttcaaaggggaagaaggaaaggactcatctggagttcctcaaaaactaatctcccttgac
atcaagtatggaaaacgtgccggttctgtcagtttctatgttcataaagttttaaaaaag
gtttcatctgacaaaaatcctgcagacgaaggatctattcaatttgaggaaaccaaggaa
cagaacaagaaaccaataaaaaactcagatcaacgtgatcaagtcaaagagattcaaaga
ttaaaaaaggatttatctgacagaagtcctgccgacaaaagatctattcaagttgaggaa
accaaggatcagaacaagaaacaaaagaaacactcagatcaatgtgatcatgacgaagag
attcaaagattgaaaaaagaaatcaagggaagggagtctgaactcactaaagctcataat
atcatggctgatcttataaagaaacgtggactctga
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