Paenibacillus sonchi: JI735_05705
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Entry
JI735_05705 CDS
T07264
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pson
Paenibacillus sonchi
Pathway
pson00521
Streptomycin biosynthesis
pson00523
Polyketide sugar unit biosynthesis
pson00541
O-Antigen nucleotide sugar biosynthesis
pson01100
Metabolic pathways
pson01110
Biosynthesis of secondary metabolites
pson01250
Biosynthesis of nucleotide sugars
Module
pson_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pson00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JI735_05705 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JI735_05705 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JI735_05705 (rfbC)
Enzymes [BR:
pson01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JI735_05705 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QQZ62139
UniProt:
A0A974SE62
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All DBs
Position
complement(1219606..1220154)
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AA seq
182 aa
AA seq
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MNVTPLKLQGASLLEPVVHGDNRGFFMESYNEDIMHKLGVNYQFIQDNQSLSAEVGVLRG
LHYQLNPKAQTKLIRVLSGVIYDVIVDIRRSSPTFGQWVGVILSEHNKRQLLVPKGFAHG
FCTLVPNTQVLYKVDEYYSPENDRGILWSDPALGIDWPTSAPVLSDKDQRHPLLKDAELN
FG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcactcctttaaaactccaaggcgcaagccttctcgaaccggtggtccatggc
gacaaccggggtttttttatggaaagctacaatgaagacatcatgcacaagcttggtgtg
aactatcagtttatccaagacaatcaatccctgtcggcagaggttggcgtactgcgtggt
cttcactaccaattgaatcctaaagcacaaacgaagttaattcgtgtgttgtctggagta
atttacgatgtgattgtggatatccgccgcagctcccctacatttggacagtgggttggt
gttattctcagtgaacataataaacgccaactgcttgtgccaaagggttttgcccatggc
ttctgcacgcttgtgccgaacacccaagtgttatacaaagtggacgaatattattcccct
gagaatgaccgcggcatattatggagtgatccggcgcttggcattgattggccgacgtct
gctccggtgttgtcggataaagaccagcgtcatccgctgttgaaggatgctgaactaaac
tttgggtaa
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