Paenibacillus sophorae: KP014_21730
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Entry
KP014_21730 CDS
T07500
Name
(GenBank) diguanylate cyclase
Organism
psop
Paenibacillus sophorae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
AAA_16
Pkinase
PK_Tyr_Ser-Thr
GAF
PAS_9
APH
PAS_8
Kdo
GAF_2
PAS
NACHT
KAP_NTPase
RIO1
ATPase_2
PAS_3
NB-ARC
AAA_22
Kinase-like
TsaE
RsgA_GTPase
ABC1
Sigma54_activat
ATP_bind_1
nSTAND3
AAA_30
AAA_7
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QWU14527
LinkDB
All DBs
Position
complement(4482793..4488210)
Genome browser
AA seq
1805 aa
AA seq
DB search
MTAIENYLILETISDNDRKSVYRCRDTVSQDTVILKVLKSEFTGHEEVMRFKQEYKMLRE
LSGCVEGVIKPLKLEERNGFFIMVLEDIQGRSLKRIMADDKPDQETLVRLVIKIVDIIGA
IHEHHIIHKDIKPSNIVWDREKDVVQVIDFDLAVKLPKEKREFQNSGVLEGSLLYVSPEQ
TGRMNRNIDYRTDFYSLGVVLYEMITGVKPFESGDMLDQIYSIIAKEAVSPYQLTGGRVS
WALSGVIMKLMEKSPEDRYRSAYGIRADLQKCLAGYGDFELAQEDKRNIFRISQKIYGRE
EELTRLAEAFRTSLRGNPQIMLISGDAGVGKTALVNELHQYISQEKGLFASGKFDQYNQN
IPYSAMIQAFGTLINQLVDSPDEDYKKNLEKSLRTALGGNGVLITNIIPELEKLIGVQPE
IEPLNPVEEINRFFLTFVNFIEGITNNERPLVLFLDDVQWADLSNLQLMEKLVLSNHLRK
LFIVCSCRPHAAMENQPLLDSIAEIDKSREVGNIVLSSLSIKDVENFIADTLNTEPGRVK
ELAEIIYARTKGNSFFLNEVLNELYKNGFIFFDDLEGKWKWVLAQISDLNINDNVVEFLM
MKLQALPEEDQRVLKLCASIGNLFDYKMLSLIAEEEPRVIAKSLIKAMGEDIIIPADTNH
SMLPSLLEETEDIPRDINAYFKFQHDRLQQVCYQMIDPVTSKKLHLKIGRLLLMQLTSGE
VEEKLVDIVTHINKGIEFIGEEDEANQVIQLNLKAAQKTKAAFGYEAAFAFLEAAVDLLK
KSPWRSDERRISEIYRLYAEYGYLTHHTDEADKACAILLNQTVDSFSIAEIYEMQANHYT
YLGMMKESIASGKRGLRALGVKIPDKPGLASVVKEFLKVKARLRGMTIEEIFGKPEMKDE
KIKLIMRLLINIFPPAFISGEANLFALIVLKKAELTLKYGNCPESAIAFIGYSILLSGFG
DLKGAFDFGRLGIRINDKFNDLKWRGASHVLYTLFCHAWNEPWDTLHDWFSKSIESSLRT
GDLLYLAHACFYVNLWNPTMDIVTNLHESNRYIAMIENTKYKEALATAKLARQQLLNLAG
ELSNPLTLDSETFSEKAYVRQLEEAKYYSGIAIYYIYKIKLLFTYESYSDSLAYIDKAYG
IIGTLAGSAFMEEFALYTFLNLAYCYKDLSAYDRMKARARMRKEYGRVKKWAAHTPENFL
LHERLMKAEWARISGNNELAGKYYDLAIAACEKGNVVRYKALVYELAAKFYNSRLFTEFA
SYLFRQSLYYYSVWGAKGKIKHINEQYQDIVKYKKEYLVGRAVTDSTESIDLNSILLASQ
AISKEIELNNLLEALMEIVIKNAGAQRGCILMRSSSDLLVEGEYRPEDDKITVVVHRHSD
DYNLPYSIIHAVEESKETLIYKDAFSEAGLINDPYIIRHQPKSLVCMPLINHNKTIAVIY
LENNLVTDVFTNERMRIINLLSREMVFSLENASLYSDLERSEEKYRELVNNMLDGIFIIQ
DMQCKFVNTALARMIGYEMEEMIDQPFDKFIALAQREDVLALHRKRINGIDAPGEYESRL
VHKDGKQEIDVILKAIFINYLNKPAVQGTVKDITERKRAEEELRKHKEHLEELVIERTKE
LKQNNEELNKNILLIEKISITDELTGLYNRRHFNTIFFREVGRAGIEKGYLAYIMLDIDY
YKKYNDTYGHYEGDNVLRRLGATIKEQAAKASDYVFRLGGEEFGIIVTGLTPEQSFEYAD
GIRRSVEELNIPHEMSPVFGYLTVSVGVAAVRVDGLTEKDIYKLADDALYQSKADGRNRV
TMLEQ
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgattgagaattatctaatactggaaacgatctccgataatgatagaaaatcg
gtttacagatgcagagatactgtctcccaggatacggttatattaaaggtcctgaaatcc
gaatttaccggacatgaagaggtcatgcggttcaagcaggaatacaagatgctccgggaa
ttaagcggatgcgtcgaaggcgtgatcaaacccctaaagctggaagagcggaacggcttc
tttatcatggttctggaagatatacaggggcgttctctgaaacggattatggctgatgac
aagccggatcaggaaactcttgtacggttggtgatcaagatcgtcgacatcattggcgcc
atccatgaacaccacatcatacataaagatatcaaaccttcaaatattgtatgggaccgg
gaaaaagatgttgtgcaggtcatcgatttcgatctggcggttaagctgccgaaagaaaag
cgggaattccaaaacagcggcgtgctggaaggaagcctgctgtatgtctctccggaacag
accggccggatgaaccggaacattgattaccggacggatttttactcactgggcgttgtg
ctgtatgagatgatcacaggcgttaaacccttcgagtctggcgacatgctggatcaaatt
tactccattattgcaaaagaagccgtctccccctatcagttaactgggggcagggtatcc
tgggcgttgtccggagtcataatgaagctgatggagaaatcgccggaagacagatacaga
agcgcctatggtatcagagccgatttgcagaaatgtttagccggttacggtgattttgag
ctggcgcaagaggataaacggaatatctttcggatttcgcaaaaaatctacggcagggaa
gaggaactaacccgcctggcagaagcttttagaacaagcctgagaggcaacccgcaaatc
atgctgatctccggggatgcaggcgtaggcaagaccgctctggtaaatgagcttcaccaa
tatataagtcaggaaaaagggctgtttgcgtcaggaaagttcgatcaatataaccagaac
attccatacagcgcgatgatccaggctttcggaacattgatcaatcagctggttgacagc
cctgatgaagattataagaaaaatctggagaagtctctgagaaccgctttgggcggcaat
ggagtcctaattacgaatatcataccggaactcgagaagctgattggcgttcagccggaa
attgagcccctgaatccggtggaggagatcaaccggttctttctgaccttcgttaacttt
atcgagggaattaccaataatgaaagacctttggtcttgtttctggatgatgttcagtgg
gccgatttgtcgaacttgcagcttatggagaagctggtgctcagtaatcatttgcggaaa
ctgttcatcgtgtgctcgtgccggccgcatgcggcgatggagaatcaacccctgttagac
tctatcgccgaaattgataagagcagggaagtggggaacatcgtcttgagctccttgtct
atcaaggatgtggagaacttcattgccgatacgcttaataccgaacctggcagggtaaaa
gaactcgcggaaattatttatgcgagaaccaaagggaattccttttttttaaacgaagtg
ttaaatgaattgtataagaacggctttattttcttcgatgatctggaaggcaaatggaag
tgggtactagcgcaaatctccgatttgaatattaacgacaatgtcgtcgagttcttgatg
atgaagctgcaggccctgccggaggaagatcagagagttctgaaattatgcgcatccata
ggcaatctgttcgattataaaatgctgtccctgatcgccgaagaggagccgcgggttatt
gccaagtctctgataaaagccatgggtgaggatattatcattcctgccgatacaaatcat
tccatgctgcccagtctccttgaagagacggaggatattcccagggatattaacgcctat
tttaaattccagcatgaccggctacagcaggtttgttaccaaatgatcgatcctgtaaca
agcaagaagctgcatttgaaaataggtagactgctgcttatgcagctcacttccggagaa
gttgaagagaaactcgtagatattgttacgcatatcaataaagggattgaatttatcggc
gaagaggatgaagccaatcaagttattcagcttaatctgaaagccgcccaaaaaacgaaa
gcggcctttggctatgaagctgcatttgcattcctagaagctgccgttgaccttctgaag
aagagcccgtggaggagcgatgagcggcgtatctcggaaatctatagactatatgcagaa
tacgggtatctgactcatcataccgatgaggcggacaaggcatgcgcaattcttctaaat
cagacggtcgacagcttttccattgccgagatctatgaaatgcaggcgaatcattatact
tatctggggatgatgaaggagtccatagcgtccgggaagcgcggtctcagagcactgggg
gtcaaaataccggacaagcccggattggcgtcggtggtgaaggaatttctaaaggtcaaa
gccagacttagagggatgacgatcgaagagattttcggcaagcccgaaatgaaggacgaa
aagataaagctcatcatgagactattgatcaatattttccccccggcgtttatctcggga
gaggccaatctgttcgctctaatcgtgctgaaaaaagcagagctgaccttgaaatatgga
aattgtcccgaatcggccattgcgtttatcggttattccatattgctgtccggatttggt
gacctcaaaggggctttcgatttcgggagactgggcataagaatcaatgacaagttcaat
gatctgaagtggagaggggcgtcgcatgtattatacacgcttttttgccatgcatggaat
gagccctgggatacgctgcatgactggttcagcaaatcgattgagtccagtctgagaaca
ggggacttgctctatcttgctcacgcatgcttctatgtcaatctatggaacccgacgatg
gacatcgtgaccaatcttcatgagagcaacagatacattgcaatgatcgagaacacaaaa
tataaagaagcgctggcgacagcgaagctggcacggcagcaacttcttaatcttgcgggg
gaactgagtaatcctcttacgttagacagcgagaccttcagcgaaaaggcttatgtgcgg
cagcttgaagaagccaagtattattcgggaatcgccatctactatatctacaagataaag
ctgctgttcacctacgagagctacagcgactcactcgcatacatcgacaaggcgtacggt
atcattgggacccttgccggctcggcttttatggaggagttcgctttgtatacattcctg
aatctggcctattgctataaagacttaagcgcttatgacaggatgaaagcaagagcaaga
atgcgcaaagaatacggcagggtaaaaaagtgggctgcccatactccggagaattttctg
ctgcacgagaggctgatgaaggccgaatgggcaagaatttcgggcaataacgaactggcc
ggcaaatattacgatctcgccattgcagcctgcgaaaaagggaatgttgtccgatataaa
gcgcttgtctatgagctggccgccaaattctataacagcagacttttcacagagtttgcc
tcgtacctgttcagacaatccttatattactattccgtgtggggagctaaaggcaagatc
aaacatattaatgagcagtatcaggatatcgtgaaatataaaaaggaatacttggtggga
agagccgtcacggattccacggagagcattgatttgaattccattcttttggcatcccag
gccatttcaaaggaaatcgagctgaataatctgttggaagcgctgatggaaatcgttatc
aaaaatgcgggagcccaaagaggctgtatcctgatgagatccagttcggatttgctcgta
gaaggagagtacaggcccgaagacgacaaaattaccgttgtggtgcatcgccattcagat
gattacaatctgccgtattccattatccatgctgtggaggaaagcaaggagactctgatt
tataaggatgctttttccgaagccgggctgattaacgatccctatattataaggcaccag
cccaaatctctcgtatgcatgccgcttatcaatcataacaagacgattgccgttatctat
ctggagaacaatctggtaacggacgtattcacgaatgaaagaatgagaattatcaatctg
ctgtctagagaaatggtattctcgcttgagaacgcaagcctgtattcggatctggagcga
tcggaggagaaataccgggaacttgtcaacaacatgctggacggaatattcattattcag
gacatgcaatgcaaatttgtcaacacggctttggcgcgaatgattggctatgaaatggaa
gagatgattgatcagccttttgataaatttattgctctggcgcagagggaagatgtattg
gctttgcaccggaaaaggattaacgggatagacgctccgggcgagtatgaaagcagactg
gtgcataaggacggtaaacaagagattgatgtgattcttaaagccattttcattaactat
ctgaataagccggcggttcaaggaacggtaaaggacattacggagagaaaaagagcggaa
gaagagctgagaaagcataaggaacatctggaagaactggtaatcgagagaaccaaagag
ctgaagcagaacaacgaggaattgaacaagaatatcttgttgatcgaaaagatatccatt
accgatgaattgaccggcttgtataatcgacggcacttcaatacgatctttttcagagaa
gtgggcagagccgggattgaaaaagggtatctggcttatatcatgcttgatattgactat
tacaaaaagtataacgacacgtacggccattatgaaggcgacaacgtattgcgcaggctt
ggggcaaccatcaaagaacaggccgccaaggccagcgattacgtattccggctgggagga
gaggagttcgggattatcgtcaccggactgactcctgagcagtccttcgagtatgctgat
ggaatcaggagaagcgttgaagaattaaacataccgcatgaaatgagtccggtcttcgga
tacttaaccgtgtcggtgggagttgcggcggtaagggtcgacggtctgacggagaaagat
atttataagctggcggatgacgcgctttaccagtccaaggctgacggccgaaaccgggtt
acaatgcttgagcaataa
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integrated database retrieval system
