Polyodon spathula (Mississippi paddlefish): 121294883
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Entry
121294883 CDS
T07273
Name
(RefSeq) beta-hexosaminidase subunit alpha-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00511
Other glycan degradation
pspa00513
Various types of N-glycan biosynthesis
pspa00520
Amino sugar and nucleotide sugar metabolism
pspa00531
Glycosaminoglycan degradation
pspa00600
Sphingolipid metabolism
pspa00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pspa00604
Glycosphingolipid biosynthesis - ganglio series
pspa01100
Metabolic pathways
pspa04142
Lysosome
Module
pspa_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
121294883
09103 Lipid metabolism
00600 Sphingolipid metabolism
121294883
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
121294883
00531 Glycosaminoglycan degradation
121294883
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
121294883
00604 Glycosphingolipid biosynthesis - ganglio series
121294883
00511 Other glycan degradation
121294883
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121294883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121294883
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
121294883
Chaperones and folding catalysts [BR:
pspa03110
]
Intramolecular chaperones
Others
121294883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
121294883
NCBI-ProteinID:
XP_041074974
LinkDB
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Position
19:complement(22694251..22705623)
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AA seq
561 aa
AA seq
DB search
MAMFKNRDFSWNAPEVSQSFLSDFLQLSCAALLLLAIVPPAQGVWPLPQSLASSAERYPL
SPREFNFLYDKGSAVQPGCTVLDTAFKSYSRLTFSGYSEGKPLTGNEKPGSVSPDGSSFG
SAPLTALVVNVQKDGCDGFPDLNSKEDYKLSIADGLGSLSAVSVWGALRGLETFSQLVYQ
DQEGTYYINKTDVVDFPRFPHRGLLLDTSRHYLPVRSILETLDAMAYNKFNVFHWHIVDD
PSFPYQSPTFPNLSSKGAFHPQTHIYTMSDVKRVIEHARLWGIRVIPEFDTPGHTQSWGK
GQPGLLTACYKGSVPSGTFGPVNPMLNTTYQFMSKLFDEISSVFPDSYLHLGGDEVNFAC
WKSNPDIQQFMKKMGFGTDYRKLESFYIENLVKIVTALNKNSLVWQEVFDNAVKVPADTV
VHVWKGNKEQYSQEMSSVTAGGFKVLLSAPWYLNTITYGQDWMETYKVEPLGFNGTAEQK
KLVMGGEACMWGEYVDATNLTPRLWPRAGAVGERLWSNEAQTSNLDTAYDRLTEFRCRLL
RRGIQAQPLFVGYCDHEYEGI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttcaaaaacagggatttttcttggaatgcccccgaagtaagccagtctttc
ctcagtgactttcttcagctgtcctgtgccgctttgttgttgctggcgatcgttcccccg
gctcagggagtgtggccactgccacagagtctcgcctcttcggcagagagatacccactc
agtccccgagaattcaactttctatatgacaaagggtctgcagtccaaccgggatgcacg
gtcctcgatacggctttcaaaagctactccaggctcaccttctccggatacagcgaagga
aaacccctaacagggaacgagaagccgggttccgtgtctccggatgggtcctcctttggt
agtgcgcccctcacagctctggtggtgaatgtgcagaaagatggatgtgatggatttcca
gacctcaattctaaagaggactataagctcagtattgctgatggattgggaagcctatct
gcagtgtcggtatggggagcgctcagaggcctggagacattcagccagcttgtttaccag
gatcaagaaggcacttattacattaacaagacagacgtggtagatttcccccggtttcca
caccgaggactcctactggacacctccagacactacctacctgtgcgctccatcctggag
actctggatgctatggcctacaacaagttcaatgtgtttcactggcacatcgtggatgac
ccctcctttccctaccagagccccactttccccaacctcagcagcaagggtgccttccac
ccccagacccacatctacaccatgagcgacgtcaagcgggtgatagaacatgcccggctg
tgggggatcagagttattcccgaatttgataccccggggcacacacagtcctggggaaaa
ggacagccaggtttgctgaccgcatgctacaaagggtcagttccctcgggtacgttcgga
cctgtcaacccaatgctgaacaccacctaccaattcatgagcaagctgttcgatgaaatc
agctcggtgtttccagactcctacctgcatctgggaggggatgaagtcaacttcgcctgc
tggaaatccaacccagatatccagcaatttatgaagaaaatgggatttgggaccgactac
agaaaactagaatcgttttacattgagaatctggtgaagattgtaacggcgctaaacaag
aactcacttgtgtggcaggaggtgtttgacaatgcagtgaaggtccctgcagacacggtg
gtccatgtgtggaaggggaataaagaacagtacagccaggagatgagcagcgtcacagca
gggggcttcaaggtcttgctgtcggctccctggtatctaaacaccattacttatgggcag
gattggatggagacctacaaagtagaaccactcggcttcaatggtacggctgagcagaag
aagctggtgatgggtggagaggcgtgcatgtggggagaatacgttgatgccacgaacctg
acgcccaggctgtggccgagagccggtgctgttggagagagactgtggagcaatgaagca
cagacctctaacttggacacggcgtacgacaggctgacagagtttcgctgcaggctgctc
aggcgtggaatccaagctcagcccctgtttgtgggttactgtgatcacgagtatgagggg
atctga
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