Polyodon spathula (Mississippi paddlefish): 121294910
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Entry
121294910 CDS
T07273
Symbol
lrrc56
Name
(RefSeq) leucine-rich repeat-containing protein 56
KO
K25425
leucine-rich repeat-containing protein 56
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121294910 (lrrc56)
04812 Cytoskeleton proteins [BR:
pspa04812
]
121294910 (lrrc56)
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Dynein assembly factors
121294910 (lrrc56)
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
121294910 (lrrc56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
121294910
NCBI-ProteinID:
XP_041075032
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All DBs
Position
19:12003199..12042368
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AA seq
653 aa
AA seq
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MESPQDPLMRPGTARVWVTEFSGSAAMNPSPDVYEDNELLVDEYLSPDKLQALAGTDDLR
LVKVLEMCVDTRENSLGNIGTYLPNLMQLKMSNSLIVSVRDLGTTLSHLQVLWMARCGLS
DLDGIPSFCSLKELYLAYNDISDMSQVSMLDHLEILDLEGNNIDDITQVQYLGLCDKLSM
LTLEGNPICLRPHPYTTKSSGYSYRAAVKELVPHLKYLDDIPADHSATPHSSKLNEDWMI
VKQSIKDGNLTEDADNRDTDKSVASGRPSSGQHPRMSRPGSARRPWTAQRPSSMGMPGSN
RPQSAGGLRPGSAGSDETTLEEDASDLTHGVGRVICGNPIKALRARRQKLNLASPSPPNP
FAHYSHKPEHTFDIELENRGREDIIAELKAWRMEHNKRLDAIQKEREPQVLKIFHSDDEG
EQDRYSLSDSAEEDEIKGALSDDWNARTSPDSSFQSSGYPSPPTDCFSTVALNLSLSPSP
PVCPSPPSPPGASTGVRRTHNLRARRLKIPDPEQQEGVQGLGMGQGTGTPPFRAQIGALH
TDEKFALLDQENSTIEVVGPKVQQDLRASLPSMESTRPVSGPAAVGPRIHKTAVDRSPQK
PIDAHQPIIRSSVKTPERPWVQHSIRPLTAKAALQRLPNRPAVIPGRGNSNSS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcctcaggacccactcatgaggccaggcacagccagagtctgggtaacagaa
ttcagtggatcagctgcaatgaacccaagtccggatgtatatgaagacaatgagctgcta
gtggatgagtatttatctcctgacaagctgcaagctctggcgggcactgatgatctgcga
ctagtcaaggttctggagatgtgcgtggatacgcgggaaaacagcctaggaaatatcggt
acctatttacccaatctaatgcaactgaagatgagcaacagtttgattgtctctgtgagg
gaccttggaaccacactatcccacctgcaggtattgtggatggctcgatgtgggctgtca
gacttagatggcattccctcattctgttcattgaaggaactctacctggcctataatgat
atttcggacatgagtcaggttagcatgctggatcatttagagattctggaccttgagggg
aataatatagatgacatcacacaggttcagtacctgggactgtgcgacaagctgagcatg
ctcacattggagggcaaccctatctgcttgagacctcacccatacactacaaagtcctca
gggtacagctatagagccgcagtgaaggaactggtcccgcacttgaagtatttggatgac
atccctgccgatcacagtgctacaccacacagcagtaaacttaatgaggactggatgatt
gtaaagcagtccatcaaagatggcaatttgacagaagatgctgacaaccgagacacagac
aagtctgtagcttcaggaaggccctcctcggggcagcatcctcgcatgtccaggcccgga
tcagccaggaggccatggacagcacagagaccgtccagcatggggatgcctgggagcaac
cggcctcagtcagctggaggattacgccctgggtctgcaggctctgacgagaccacgctg
gaggaggatgccagcgacttgacacacggtgttggtcgggtcatttgtgggaatcctatt
aaagccctacgtgcaaggcggcaaaaactgaatctggcttctccatctcctccaaatccc
tttgcacactacagccacaaaccagaacacaccttcgacatagaacttgaaaataggggt
cgagaggacattattgctgaactgaaggcatggaggatggaacataacaagcggctggat
gcgattcagaaggagcgtgagccccaggtgctgaagatcttccacagtgatgatgagggg
gagcaggatcggtacagcctgagtgacagtgctgaggaagatgagatcaagggagccttg
agtgatgattggaatgccaggacatctccagactcctcattccagtcctctggatacccc
tctcctcctactgactgtttttccacagtggccctaaacctgtccctgtctccgagcccc
ccagtttgcccgtctcccccctctcccccgggagcttccactggagttcggaggacccac
aacctgcgagcgcggcgcctgaagatcccggacccagagcagcaggagggagtacagggg
ctgggaatgggacagggaacagggacacctccattcagagcacagattggagcactacac
acagatgagaagtttgcccttctggatcaagagaattcaaccatagaggtggtggggcca
aaagtacaacaggatctgagggccagtcttcccagcatggaatccaccaggcctgtttct
ggaccagctgctgtaggacctcggattcacaaaactgcagttgacagaagccctcaaaaa
cccattgacgcccatcagccaattatccgctcttctgtaaaaacacctgagagaccctgg
gtacagcatagtatccgcccactcacagcaaaggctgcgctacagagactgcctaacaga
cccgctgtcattcctggacggggaaacagtaactccagctaa
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