Polyodon spathula (Mississippi paddlefish): 121295611
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Entry
121295611 CDS
T07273
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121295611
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121295611
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
121295611
NCBI-ProteinID:
XP_041076413
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All DBs
Position
20:25789227..26061405
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AA seq
411 aa
AA seq
DB search
MRKTSHYHMLCSMANSGCLLLSNSGMLPHSLQCPPAFLYLPEGNQEATAPPEAMAQPYPP
AQYPPPPQNGIPAEYAPAHPHTTQDYTGQSTVPEHAMTIYTPTQTHSELPGTNANTPSLT
GTTTVPQTDDVAQTEVSQQLQSTDPLEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILD
VEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTNKKVANPY
TNAIASEDTDFAEDFSRLLGDNKEHTFMTLPHSSQGWKLNPVMGAVYGPEFYAVTGFPYP
TTAAAVAYRGAQLRGRGRAVYNTFRATPPPPPIPTYGAVVYQDGFYGAEIYGGYAAYRYT
QPATATTAAAYSDSYGRVYATADPYHHTIGPYSVGTMASLYRGGYNRFTPY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaacatcccactaccatatgctgtgctctatggccaactcgggctgccttctg
ctctccaactccgggatgctgcctcactctcttcagtgtcccccagcattcctctacctt
cccgagggtaaccaagaggctacggcccccccagaagcgatggcacagccctatcccccg
gcccagtacccccctccccctcagaatgggatcccagcggagtacgccccggcacacccc
cacaccacgcaggactacacgggccagagcacggtacccgagcatgccatgaccatctac
acgccaacgcagacccactcagaactgcctggcaccaacgccaacacaccctctctcacc
ggcacaacgacagtaccgcagacagacgacgtggcacagacggaggtttcacagcagcta
cagtccacagacccgttagagaagcagcaacccaaacggttacatgtctccaacatcccc
ttccgcttccgagaccccgacttacggcaaatgtttgggcaatttgggaaaatattagat
gtcgaaataatttttaatgagcggggctccaagggcttcggctttgtaacttttgaaacg
agcgcagacgcagaccgcgcgcgggagaaactaaacggtacaatcgtagaggggcggaaa
attgaggtaaataatgcaacagcaagagtgatgacgaacaaaaaggtggcaaacccctac
acaaacgcaattgccagcgaggatacagattttgctgaggatttctccaggctgctcgga
gacaacaaggaacatacattcatgacgttgccccattcaagtcaaggttggaagttgaac
ccagtgatgggagctgtttacggccccgagttttatgcagtaactggcttcccatatcca
accacagcggcggcagtggcatatagaggagcccaattaagaggccgggggcgtgcggtg
tacaacacattccgtgccacacctcctcccccgcccatccctacctatggagcagttgtt
tatcaagatggattttatggtgcagaaatttatggcgggtatgcagcttacagatacact
cagccagctaccgccacgactgcagctgcctacagcgacagttatggcagagtctatgca
acagctgacccctatcatcacacaattggaccatacagtgttggaactatggctagccta
tacagaggagggtacaaccgcttcaccccgtactag
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