Polyodon spathula (Mississippi paddlefish): 121296159
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Entry
121296159 CDS
T07273
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121296159
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121296159
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
121296159
NCBI-ProteinID:
XP_041077350
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All DBs
Position
21:25072071..25271843
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AA seq
412 aa
AA seq
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MRKTSRYHMLCSMANSGCLLLSNSGMLPHSLQCPPAFLYLPEGNQEATAPPEAMAQPYPP
AQYPPPPQNGIPAEYAPAHPHTTQDYTGQSTVPEHAMTIYTPTQTHSEQPGTNANTSSLT
GTTTVPQTDDVAQTEGSQQLQSTDPLEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILD
VEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTNKKVANPY
TNAIASEDTDFAEDFSRLLGDNKGHTFMTLPHSGWKLNPVMGAVYGPEFYAVTGFPYPTT
GAAVAYRGAHLRGRGRAVYNTFRAAPPPPPIPTYGAVVYQDGFYGAEIYGGYTAYRYAQP
ATATAAAAYSDSYGRVYATADPYHHTIGPAATYSVGTMASLYRGGYNRFTPY
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaacatcccgctaccatatgctgtgctccatggccaactcgggctgccttctg
ctctccaactctgggatgctgcctcactctcttcagtgtcccccggcattcctctacctt
cccgagggtaaccaagaggctacagcccccccagaagcgatggcacagccctacccccca
gcccagtacccccctccccctcagaacgggatcccggcggagtacgccccggcacacccc
cacaccacgcaggactacacgggccagagcacggtacctgaacacgccatgaccatctac
actccaacgcagacccattcagaacagcctggcaccaacgccaacacatcctctctcacc
ggcacaacgacagtaccgcagacagacgatgtggcacagacagagggctcacagcagcta
cagtccacagacccgttagagaagcagcaacccaaacggttacatgtctccaacatcccc
ttccgcttccgagaccccgacttacggcaaatgtttgggcaatttgggaaaattttagat
gttgaaatcatttttaatgaacggggctccaagggcttcggctttgtaactttcgaaacg
agcgcagacgcagaccgtgcgcgggagaaactaaacggtacaatcgtagaggggcggaaa
atagaggtaaataatgcaacagcaagagtgatgacgaacaaaaaggtggcaaacccctac
acaaatgcaattgccagcgaggatacagattttgctgaagatttctccaggctgctcgga
gacaacaagggacatacattcatgacgttgccccattcaggttggaagttgaacccagtg
atgggagctgtttacggccctgaattttatgcagtaactggcttcccatatccaaccaca
ggggcggcagtggcctatagaggagcccacttaagaggccgggggcgtgcagtgtacaac
acgttccgtgccgcacctcctcccccacctatccccacctatggagcagttgtttatcaa
gatggattttatggtgcagaaatctatggcgggtacacagcttacagatacgctcagcca
gccactgccacggctgcagctgcctacagtgacagttatggcagagtctatgcaacagct
gacccctatcatcacacaattggaccagctgccacatatagtgttggaactatggctagc
ctatacagaggagggtacaaccgcttcaccccgtactag
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