Polyodon spathula (Mississippi paddlefish): 121298016
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Entry
121298016 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04144
Endocytosis
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121298016
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121298016
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121298016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121298016
04121 Ubiquitin system [BR:
pspa04121
]
121298016
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121298016
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121298016
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
HECT type E3
121298016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF6246
Motif
Other DBs
NCBI-GeneID:
121298016
NCBI-ProteinID:
XP_041080638
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All DBs
Position
23:21649360..21676178
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AA seq
878 aa
AA seq
DB search
MACSGSRSGSVNGLTMKAQLQITVLSAKLKENKKNWFGPSPYVEVVVDGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLYFKVWSHQTLKSDALLGMAILDICETLKSNNMKISEVVETL
QLCSDKDPADVVGDLSVCLDGMQVDPETFTSVDISTLAPSTMQNGDSQRNSGVFRTSRDA
SPSTESIEDMVAINDGAVNGTDSPSLSVGGSRPLRPPRPSRPPPPTPRRPASSVSTNGTL
SITPENLSSSDLYSSEPSVSLVVPSPGAPELPPRSSTLPDYATPGAGPPKNSTTRVSPVS
TGPLPPGWEQRVDQNGRVYFVDHIEKRTTWERPEPLPPGWERRVDPMGRIYYVDHITRST
TWQRPTLESVRNYEQWQLQRNQLQGAMQQFNQRFIVGQDQVSAAPNKEFDPLGPLPHGWE
KRTDSNGRVYFVHHTTRKTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTT
YIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKISVTRKTLFEDSFQQI
MSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQIN
PASFINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLNDLESIDPEFY
NSLIWIKENNIEECGLEMYFSVDKEILGEVTTHELKADGSNVLVTEENKEEYIKLVAEWR
LSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVLLCGMQEIDLADWQRSTIYRHYTRS
SKQILWFWQFVKEMDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWL
PRSHTCFNRLDLPPYKSYEQMKEKLMFAIEETEGFGQE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcagtggttccagatcaggttctgtaaatgggcttacaatgaaagcacagctt
cagatcacagtactttcagccaagctgaaagaaaacaaaaagaactggtttggtcccagt
ccttatgtggaggttgtagtggatgggcagtcgaaaaaaacagaaaaatgtaacaacacc
cacagccccaaatggaaacaacctctcactgtaattgtaaccccgtttagtaagttgtac
ttcaaagtgtggagtcatcaaacattaaaatccgatgctttgttaggaatggccatcttg
gatatctgtgaaactctgaagtccaacaatatgaaaatttccgaggtggtcgagacacta
cagctctgcagcgacaaggacccagcagacgtcgttggagatttgtctgtttgccttgat
gggatgcaggtcgatccagaaacgtttacatctgtggatatcagcaccctagccccaagt
acaatgcagaatggggattcacaaagaaacagtggtgtttttaggacaagcagagacgct
tctccctcaactgaaagcattgaagacatggttgccataaacgatggggcagtgaatggc
acagattctccatctctctcagtaggaggttccagacctctgcgcccccccagaccttct
cgtcctccaccaccaacaccacggagacctgcctcgtcagtctctaccaatgggactttg
tccatcacacctgagaatttgtcttccagtgatctctacagctcagaaccttctgtgagt
cttgtggtgccctcacctggagctcccgagttaccaccacgtagctctacattacctgac
tatgcgacaccgggtgctggaccacccaagaactccactacaagagtcagcccagtcagt
acgggacctctccctcctggatgggagcagagagtagaccagaatggccgtgtttatttt
gtagatcacattgaaaagaggacaacctgggaaaggcctgagcccctgcctcctggctgg
gaacgccgtgttgaccctatgggtagaatatattatgttgaccacatcaccaggtcaaca
acctggcagcgccctacactagagtctgtgaggaactatgagcagtggcagctacagcgg
aaccagctgcagggagccatgcagcagtttaaccagaggtttatagttgggcaggatcaa
gtatcagctgcaccgaataaagagtttgatccacttgggcctttaccacatggatgggag
aaaagaacagacagtaacggcagagtgtactttgttcatcacaccacccgcaaaacccaa
tgggaagacccacgaacccaaggccttctgaatgataagccattgccagagggttgggag
atgaggtttacagttgacggtattccatactttgtggatcacaatagaagaactacaacg
tacattgatcctcgaactgggaagtcatccctagaaaacgggccacaaattacatatgta
cgagacttcaaagcaaaggtccagtacttcagattctggtgtcagcaactgtcgatgcct
cagcacataaagatcagtgtaacaaggaaaacactatttgaagattcatttcaacagata
atgagctttaatgcacaggatcttagaagacgactctggattatttttccaggagaggag
ggtctagattatggcggtgtggcgagggagtggtttttcttgctgtcccatgaagtgctg
aaccccatgtactgcttatttgaatatgctgggaaggacaactactgcctgcagatcaac
ccagcctccttcatcaaccctgatcatctcaaatacttcaagttcatcggcaggttcatt
gccatggctttgttccatggaaagttcatcgatacaggattctccttgcctttttataag
cgcatactaaacaagcctgtgggactgaatgatttggaatcaatagaccctgagttctat
aactccctaatctggataaaggaaaacaacatagaagaatgtggcctggaaatgtatttc
tctgtggacaaagaaattttaggcgaagtcacaactcatgaactgaaagcagatggcagc
aatgtactggttacagaagaaaataaagaagagtatatcaagcttgtagcagagtggagg
ttgtccagaggtgtggaagagcagacacaggctttctttgagggcttcaatgaagttctc
ccacagcagtatctacaatattttgatgccaaggagctggaagtgcttctctgtggaatg
caggagattgacttggctgactggcagaggagcacaatctatcgtcactataccaggagc
agcaaacaaatcctttggttctggcagtttgttaaagagatggacaatgagaagcgaatg
aggctgctgcagtttgtcacaggaacatgtcggctaccagttggaggatttgctgacctg
atggggagcaatggccctcagaagttctgcattgagaaagtgggaaaagaaaactggtta
ccaagaagtcacacctgctttaaccgtttggatttgccaccatacaaaagctatgaacag
atgaaagagaagttgatgtttgcaattgaagaaactgagggttttgggcaagagtag
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