Polyodon spathula (Mississippi paddlefish): 121298272
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Entry
121298272 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1-like
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121298272
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121298272
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121298272
03036 Chromosome and associated proteins [BR:
pspa03036
]
121298272
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121298272
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
121298272
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
121298272
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121298272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
121298272
NCBI-ProteinID:
XP_041081236
LinkDB
All DBs
Position
23:2587049..2596397
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AA seq
716 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQSPVYGFIFLFKWIEERRSRR
KVSTLVDETSVIDDDIVNDMFFAHQLIPNSCATHALLSVLLNCNDVELGLTLSRMKEFTK
GFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRL
FELDGLKAYPIDHGPWGEEEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIK
YESKLHVLKMNRQTVLEGLQQLIRVTQPELVQDRKAQESSPPEETSPTVKKEAESDKALA
TADPSRTESAESSSSQSQPEPNPSSTSRSKAPRKQVLCSQTDPPVTPSPTVQRWPAFLDN
HNYAKSPMQEEEDLAAGVGRTRVPVPSLQPYSDDEDDYDEEEEDTSKAEAPVRYKRKPGL
KQSKGGQLSLLQPNTMGVLTEKLKESQRKDLTVPLTIKTAAAGGICITAPSQPSPTPSNE
STDTASEIGSAFNSPLRSPIRSASATRPSSPVTSHLSKVLFGEDEGLLRLDCLRYNRAVR
DLGQAVSSALLHLQADGVLCTLAHTEQSPKEVKNESGQLQSNVEENNEALEPRHSKEKLD
TGENSTSKTIGEKYSPKELLALLKCVEAEIANYEACLKEEVEKRKKYKIDDQRRTHNYDE
FICTFISMLAQEGMLASLVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagggtggcttgaactggaaagtgaccccggactcttcactctacttgtggag
gattttggggtgaaaggagtacaggtggaggagatctatgacttgcagagtaaatgccaa
agtcctgtgtacggcttcatcttcttatttaagtggattgaagagcgccgatcccggagg
aaggtctctaccttggtggatgagacgtctgtcattgatgatgacattgtaaacgacatg
ttctttgcacatcagctgatccccaactcgtgtgcaacccacgccttgctgagtgtcctc
ctgaactgtaacgatgtagagctcggactaaccctaagccgtatgaaggagtttaccaaa
gggttcagcccagagagtaaaggctatgcaattggcaatgcaccagagcttgcaaaagct
cacaacagccatgctagacctgaaccacgacaccttccagagaaacagaatgggatcagt
gctgtgagaacgatggaggccttccacttcgtcagttacgtgccgatcaaggggcgcttg
tttgagctcgatgggctgaaagcgtaccccattgaccatggaccttggggagaggaagag
gagtggacggacaaagccaggagagtcatcatggagaggataggactggctacagctggg
gagccataccacgatatccgcttcaacctgatggctgttgtccccgaccggcgtataaaa
tatgagtctaagttacacgtgctcaaaatgaacagacagaccgtgctggagggccttcaa
cagcttatccgggtgacacagccagaactggtccaggatcggaaagcacaggaatcctcg
cctccagaagagacttctcctacagtgaaaaaggaagcagagtcagacaaggcactggct
acagcagacccctcacgcacagaatctgcagagtcttcctcttcgcagagccagccggaa
ccaaacccgagctcaacaagcagatcaaaagccccaaggaaacaggtgctgtgctcgcag
accgacccgcccgtcacccccagccccacagtccagcggtggccagccttcctcgacaac
cacaactacgccaagtctcccatgcaggaggaggaggacctagcagcgggggtagggcgg
acccgggttccagtcccctcacttcagccttactcggatgatgaggatgattacgatgaa
gaggaagaggacaccagcaaagccgaggctccagtgaggtacaagaggaagcctggcctg
aagcagtcaaagggaggccagctgtccctcttgcagcccaacaccatgggcgtgctgact
gagaagctgaaggagtcccagaggaaggacctgacggtgccgctcaccatcaaaactgct
gcagcggggggcatctgcatcactgccccctcccagccctcacccacccccagcaatgag
agcacagacaccgcctcggagattggcagcgccttcaactccccgctgcgctcgccaatc
cgctcagccagcgccactcgaccctccagccccgtcacctcccacctctccaaggtgctg
ttcggggaggacgagggcctgctgcgacttgactgcctgcgctacaaccgggccgtgagg
gacctgggccaggccgtcagctctgcattgctccacctgcaggccgacggagtgctctgc
accctcgctcacaccgagcaaagtcctaaggaggtgaagaatgagagcgggcagctgcag
agcaatgtagaggagaacaatgaggctcttgaacccagacacagcaaggagaaactggac
actggggaaaacagtaccagcaaaaccataggagagaaatactcccctaaagagctcctc
gctttgctcaaatgtgtagaggctgagatagccaactatgaggcctgcctgaaagaggag
gttgaaaaaagaaagaaatacaagattgatgaccaaaggaggactcacaactatgacgag
tttatatgtacttttatatccatgctggcacaggaaggaatgctggccagccttgtggaa
cagaacatctctgtacgacgtcgtcagggcgtcagcatcggacgcctccacaaacagagg
aagccggaccgtcggaaacgctcccgaccatacaaagccaagcggcagtaa
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