Polyodon spathula (Mississippi paddlefish): 121298551
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Entry
121298551 CDS
T07273
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121298551
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121298551
04091 Lectins [BR:
pspa04091
]
121298551
CD molecules [BR:
pspa04090
]
Proteins
121298551
Lectins [BR:
pspa04091
]
I-type lectins (Siglecs)
121298551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
Ig_5
Adeno_E3_CR1
C2-set_2
Motif
Other DBs
NCBI-GeneID:
121298551
NCBI-ProteinID:
XP_041081611
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All DBs
Position
24:17628860..17727667
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AA seq
582 aa
AA seq
DB search
MGAAILGSTLAQVASVIILNEADETVQGGDWGVNYPPQEMCALRGSSVVIPCTYDYPELF
HGTVLTVVTVKWFRTSIRDVADPGTYVYHSSGINVSPEYEHRTEYLGNKVKNCTLKISAL
QSSDRDRYYFRFETNNPSGKWTGRTGVSLSITELKVTLDPPVLYNNVREGSFVSLSCGFD
RCNLSESSFVWYREGQPIKNEKSNKLQFIVSYERSGKYCCAAAENSSIKSEEFDLIVKYS
PKNTSISVRAPGGIVEGSTVTLTCSSTANPPASSYTWFKGNQINVVNSGSEQNLIFANIS
LADSGEYYCESSNEIGRQKSPPMQIHVKYSPKNTSISVRAPGGIVEGSTVTLTCSSTANP
PASSYTWFKGNQINVVNSGSEQNLIFANISLADSGEYYCESSNEIGRQKSPPMQIHVKYS
PKNTSISVRAPGGIVEGSTVTLICSSTANPPASSYTWFKGNQINVVNSGSEQNLIFANIS
LADSGEYYCESSNEIGRQISPPMQIHVKYKTNIILVTIVAIQAAIIFALLVVICVKWFKS
KSQEDSQNIQPSSGGDTYATIDLKTLSSDYDTLQVKHQADYK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggccattttgggaagcacgcttgcacaggtcgcctctgtcataatcctgaac
gaggctgatgagactgttcagggtggtgactggggagtgaattatcctccacaagagatg
tgtgctttgagaggatcctctgtggtcataccttgtacatatgattatcctgaactgttt
catggcacagttttaactgtagtaactgtgaagtggttcaggacttctattcgtgatgtt
gctgatccaggcacatatgtgtatcacagcagtggaatcaatgtgagtcctgaatatgaa
caccggacagagtatctagggaacaaagtcaagaactgcacgctaaagataagtgctctg
caaagcagtgacagagacagatattattttagatttgaaacaaataacccttctggtaaa
tggactggtagaactggtgtgtcactttcaataaccgagctaaaggttaccctggaccct
cctgttctatataataatgtgagagaaggatcttttgtttccctgtcctgtggctttgac
cgctgcaacctgagtgagagcagctttgtctggtacagggaggggcagccaatcaagaat
gagaaatcaaacaaacttcagtttattgtttcttatgagcgttctgggaagtactgctgt
gctgctgctgagaacagcagcattaaatctgaagaattcgacttgattgtgaaatactcc
ccaaagaacacctcgatctcagtcagggctcctggtggaatagtggaggggagcacagtg
acgctgacctgcagcagcacagcaaacccaccagccagcagctacacctggttcaagggg
aatcaaatcaatgtcgtgaactcaggcagtgaacagaatctcatctttgcaaacatcagc
cttgctgacagtggagagtattactgtgaatcaagcaatgagattggaagacaaaaatct
ccgccaatgcaaatacatgtaaaatactccccaaagaacacctcgatctcagtcagggct
cctggtggaatagtggaggggagcacagtgacgctgacctgcagcagcacagcaaaccca
ccagccagcagctacacctggttcaaggggaatcaaatcaatgtcgtgaactcaggcagt
gaacagaatctcatctttgcaaacatcagccttgctgacagtggagagtattactgtgaa
tcaagcaatgagattggaagacaaaaatctccgccaatgcaaatacatgtaaaatactcc
ccaaagaacacctcgatctcagtcagggctcctggtggaatagtggaggggagcacagtg
acgctgatctgcagcagcacagcaaacccaccagccagcagctacacctggttcaagggg
aatcaaatcaatgtcgtgaactcaggcagtgaacagaatctcatctttgcaaacatcagc
cttgctgacagtggagagtattactgtgaatcaagcaatgagattggaagacaaatatct
ccgccaatgcaaatacatgtaaaatacaaaacgaatattatattagtcacaatagtggca
atacaagcagccatcatctttgccctcctggtagtaatttgtgtcaaatggtttaaatca
aaatcacaagaagatagccagaacatccagcccagcagtggaggtgacacctacgctact
attgatctgaaaaccctcagctcagattacgacacattacaggtgaaacatcaagctgat
tacaagtga
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