Polyodon spathula (Mississippi paddlefish): 121298782
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Entry
121298782 CDS
T07273
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1 isoform X1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121298782
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121298782
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
GOLGA2L5
PH_11
MYO6_lever
PH_13
PH_20
IQ
Motif
Other DBs
NCBI-GeneID:
121298782
NCBI-ProteinID:
XP_041081928
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All DBs
Position
24:complement(15453685..15490433)
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AA seq
1256 aa
AA seq
DB search
MQKGIRLNDGHVTYLGILAKKDGTRRGYLSKKSSDNTKWHTKWFALLQNMLFYFENDSSS
RPAGLYLLEGCTCDRAPSPKPSLSAKECLEKQYYFTVNFNHDNQKALELKTEDVKDCDEW
VAAITHASYRNLATEHESLTQKYLHLLQIVETEKTVAKQLRQQIEDGEIEVERLKAEIGG
LLKDNERIQSDPTTAPSDDDSDIKKIKKVQSFLRGWMCRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPSITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLEYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQIPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHLTKNGVMSLIDCTLMEEPEGTDEESKPDK
SGQDMEHLDFKIVVEPKDTQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFEE
NSKVTVPQMIKSDTSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTTAEVVLDKLITIYKKPISAIPARSLELFFASSQNNKLLYGEPPKSPRAS
RKFSSPPPLSITKSSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSSMSPFSK
TSLDINKLYVSSSIPSKIPDEAETKTDKPDEPSSNKQEVSVREECDNDPIQSDEAETETS
PTKSPTTPKNVKCKNSSDFSLFSYNNGVVVTSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLATTGYPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHAQDFESSGELKF
KVISFLEEVIHDPELLTQERKAAANIIRTLTQEDPGDSQITLEEIVQMAEGVQSEPFDNH
SALEIAEQLTLLDHLVFKGIPYEEFFGQGWMKPDKNERTPYIMKTTKHFNHISNLIASEI
LRSEDVNVRVTAVEKWVAVADICRCLHNYNAVLEITSSLNRSAIFRLKKTWLKVSKQTKA
LIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDGLVNFSK
MRMISHIIREIRQFQQTAYKVEHQPKTTEYLLDNNAVLDEESLYEASLRIEPKLPT
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaggaattcgactcaatgatggccatgttacctacctgggtattttggcgaaa
aaggatggcacaagacgagggtatttgagcaagaagagctctgacaacacaaaatggcat
accaagtggttcgctttgctgcagaatatgttgttttattttgagaacgactccagctcc
agacccgcgggattgtatctgttggaaggatgcacttgtgacagagctccctctcctaaa
ccttctctgtcagccaaggaatgtttagagaagcagtactacttcactgttaacttcaac
cacgacaaccagaaggccctggagctgaagacagaggatgtcaaagattgtgacgaatgg
gtggcagcaataacacatgcaagctataggaaccttgcgacggagcacgagtcactcacg
cagaagtacctccatttgctgcagattgtggagacagagaaaacagttgctaagcaacta
cgacaacagatagaagatggggaaatagaggttgaacgcctgaaagccgagattggaggt
ttgctcaaagacaacgagcgcattcagtctgacccgactactgcacccagcgacgatgac
tctgacatcaagaaaatcaaaaaggtgcagagtttcctccggggctggatgtgtcggagg
aagtggaagacaatcattcaggactacatcaggtctccccacgccgagagcatgaggaag
aggaaccaggtggtgttcagcatgctggaggcagaggctgagtacgttcagcagctgcac
atcctggtcaacaacttcctgcggccgctgcgtatggctgccagctccaagaaaccttcc
atcacccacgacgacgtcagcagcatattcctgaacagtgaaacaatcatgtttttgcac
caaatattttaccaaggactaaaagcaagaatagcaagctggccaacgctagtattagcc
gacctctttgacatcctgctgcccatgctgaatatttaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctggcacactgcaagcagaaccgagacttcgacaagctgctc
aagcaatacgaggccaagcccgactgtgaggagaggactctggaaaccttcctgacctac
cccatgtttcagatccccaggtacatcctgacgctgcacgagctgctggctcacaccccg
catgagcatgtggagaggaacagcctggagtatgccaagtctaagctggaggagctctca
agaatcatgcacgacgaagtgagcgagacggaaaacatccggaagaacctggccatcgag
cgaatgatcgtggaagggtgtgagatcctcctcgataccagccagacatttgtcagacaa
ggttctctcatccaaataccgatgagcgaaaaggggaaaatcaccagagggaggctgggg
tcgttgtctctcaagaaggaaggggaaaggcagtgttttctgttctccaaacatttaata
atctgtaccagaggatcgggagggaaactccatttaacaaagaacggagtgatgtcactc
attgactgcaccttgatggaggagccagagggcaccgatgaggagtcaaaaccagataaa
tccggacaagacatggagcacttggacttcaaaatcgttgttgaaccaaaagacacacag
tcgttcactgtcatcctggtagcttcctcacgtcaagagaaatccgcatggacaagcgat
atcagccagtgcatagacaatatccgatgcaatggtttgatgatgaatgcattcgaagaa
aactcaaaggtgacagttccacagatgatcaagtccgacaccagcctgtactgcgacgac
gttgacattcgcttcagcaagatgatgaactcctgcaaggtcctacagatccgctatgca
agcgtggagaggcttctggagagactgacagacctgaggtttctcagtatagactttctc
aacaccttcctgcattcatacagggtgttcaccacagccgaagtggtgctggacaagctc
atcaccatttacaaaaaacctatcagtgcaatacctgcaaggtctctggagctgtttttt
gcaagcagtcaaaacaataagcttctgtatggagagcctcccaagtccccaagggccagc
cgcaagttctcctcccctccccctctgtccatcaccaagtcatcgtcccccaaccgtcgg
aggaaactctccctgaacatccccatcatcaccgggggcaaggcgctggacctggctgcc
ctgagctgctcctccaatggctatgcaagcatgtactcttccatgtccccattcagcaag
accagcttggacatcaacaagctgtacgtgtccagctccatccccagcaagatccccgat
gaagctgaaaccaaaacggacaagccagacgagccttcctccaataagcaagaagtatca
gtcagagaagaatgtgacaatgacccaatccagagtgacgaagctgaaacagagacgtca
ccaacaaagtctccgacaactcccaaaaacgtgaaatgcaaaaactcttcagacttctcc
ttgttttcctataacaatggtgtggtggtgacatcctgccgagagctcgacaacaatcgc
agtgcgctgtcggctgcctctgctttcgccatagcaacagcgggggccaatgaaggcacg
cccaccaaggaaaaatacaggaggatgtcactggcaactacagggtaccccactgaccag
aggaacggggacaaggagtttgtgatcaggagagcggcgacgaaccgagtcctgaacgtt
ctgcgacactgggtctccaaacatgcacaggactttgaatccagcggtgaattgaagttt
aaggtgatcagcttcctggaggaggtgattcacgaccccgagcttctgacccaggagagg
aaagcagctgccaacatcatcagaactttaactcaagaagaccccggagacagtcaaata
accctggaggagattgtgcagatggcggaaggtgttcagtctgaaccatttgataaccac
tctgccctggagatcgctgagcagctgaccctgctggaccacctcgttttcaaggggatc
ccgtatgaggagtttttcggtcaaggttggatgaagcctgataaaaacgaaaggactccc
tacattatgaaaaccaccaaacacttcaatcatatcagcaacttgatagcctcagagatt
ctgcggtcggaagacgtgaacgtgcgcgtgacagcggtggaaaagtgggtggccgtggct
gatatctgccgctgtctgcacaactacaacgccgtgctggagatcacctcctcgctgaac
cgcagcgccatcttcaggctgaagaaaacctggctcaaagtctccaagcagacaaaagct
ctgattgacaagttacagaagctggtctcatccgaaggcaggtttaagaaccttcgggag
gctttgaaaaattgtgatcctccgtgtgtgccgtacctgggcatgtacctgacagacctg
gccttcatcgaggagggcacacccaactacactgaggacgggctggtcaacttctccaaa
atgaggatgatctcccatattattagagaaatcaggcagttccagcagacagcctacaaa
gttgaacaccagcccaagacaacagagtatttgctggacaacaatgctgttctggatgaa
gaaagtctttatgaagcctccctgagaatagagcccaaattgcctacctga
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