Polyodon spathula (Mississippi paddlefish): 121299630
Help
Entry
121299630 CDS
T07273
Name
(RefSeq) calcium-binding protein 1-like isoform X1
KO
K23531
calcium-binding protein 1/2/4/5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121299630
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121299630
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
121299630
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
EF-hand domain-containing proteins
Calcium binding proteins
121299630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
AIF-1
EF-hand_9
DUF5580_M
EF-hand_4
DIMCO_N
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
121299630
NCBI-ProteinID:
XP_041083412
LinkDB
All DBs
Position
25:21532716..21544672
Genome browser
AA seq
477 aa
AA seq
DB search
MSFLPKSESKSSLLKSAAAARKSASDSVSGRRSNHHPGNHSGRSGGGGRAVESDLSGGSG
CHGEPRWPADGDVSTRRPLCHPGASRENGARQGCRNESHATAAPGHHPDQHQAASGLSGQ
EQCKTSKHHHHRHHHHHHRHHNHQHHPAPGHPPPQHSASDPGHSDSLPASTNAATPQSKQ
YKDLACFYESAREKSRAGSSLSLASSHSGNNPRQTPSSSPLAKSSSRASGKACKRSTSAG
CAETESSLSHNLRPILNPVYGQIRREEKRSYKAVQTCEEAAPPSSLLDPCQGPLLALAQN
CTLMHNLLGPACIFLRKGFAENRQPDKELRPEELEELREAFKEFDKDRDGFISCKDLGNC
MRTMGYMPTEMELIELSQQINMNQGGQVDFEDFVELMGPKLLAETADMIGVKELRDAFKE
FDTNGDGHISTAELRDAMRKLLGQQVGHRDLEEILRDVDLNGDGHVDFEEFVRMMSR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcttccaaaaagcgaatccaaatcgtctttgctgaaatcggcagctgctgcg
aggaaatcggcttccgactcagtctccgggaggagaagcaatcaccaccccggcaaccac
agcgggaggagcggtggaggcggcagagcagtcgagtcggacttgagcggcggcagcggc
tgtcacggagagccccgttggccggctgacggggatgtcagcacccgcagacccctgtgt
cacccgggcgccagccgggagaacggggcgaggcagggctgcaggaatgaatcgcatgcc
acggctgcccccgggcatcatccagaccaacatcaggcggcatcaggattgagcggtcag
gagcaatgcaaaacttcaaagcatcaccaccaccggcaccatcaccatcaccatcgccat
cacaaccatcaacaccaccctgcaccgggacatcctcccccccagcacagcgcctcggac
cccgggcactcagatagcctgcccgcctccaccaacgccgctacccctcagtctaaacag
tacaaggacctggcgtgcttctacgagtcggcgcgggagaaatcccgagccggttcttct
ctgagcctcgcctccagccattcggggaacaacccgcggcagaccccttcctcctccccg
ctcgccaagtcttccagccgcgcgtccgggaaggcgtgcaaaaggagcaccagcgccggg
tgtgcagagacagagtccagcctgtcccataatctcagacccatcctcaacccggtgtat
ggccagatccgtcgggaggagaagcggagctacaaggcagtgcagacctgtgaggaggcc
gcaccccccagctccctgctcgacccctgtcagggccccctgctggctctagcgcagaac
tgcaccctcatgcacaacctgctgggacccgcctgcatcttcctgcgcaagggcttcgcc
gagaaccggcagcctgacaaagagctgaggccggaggagctcgaggagctgcgcgaggcc
ttcaaggagtttgataaggaccgtgacggcttcatcagctgcaaggacctgggcaactgc
atgagaaccatgggatacatgcccactgagatggagctgatcgagctgagccagcagatc
aacatgaaccagggcggccaggtagactttgaagactttgtggagctgatgggaccgaag
ctcctggcagagacagcggacatgatcggagtgaaggagctgagagacgccttcaaagag
tttgacactaatggggacggacatatcagcactgcggagctgcgggacgccatgaggaag
ctgctgggacagcaggtgggacacagggacctggaggagatcctgagggacgtagacctg
aacggggacggacacgtggacttcgaggagtttgtgaggatgatgtcacgctga
DBGET
integrated database retrieval system
