Polyodon spathula (Mississippi paddlefish): 121299966
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Entry
121299966 CDS
T07273
Name
(RefSeq) epiphycan-like isoform X1
KO
K08127
epiphycan
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121299966
Proteoglycans [BR:
pspa00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
121299966
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
121299966
NCBI-ProteinID:
XP_041084195
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Position
25:complement(6998865..7003909)
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AA seq
331 aa
AA seq
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MMKQPLICLALALSLLEVCLCAPPRENYHLTGETDWENIDLNNYGDLYDYEDLESVVGER
ERIEVGTVAPPPKVTPASQNVPPPETPPPDLEEEVPLRPRSTTPPPRLDFAGPGLFGPQT
GLGLPTCLLCVCLSTSVYCDDVDLEYVPPLPKDTTYFYARFNKITRVGDNDFLNLNKLKR
IDLTGNHITELDEDAFLKLPALQELLLAENKIRSLPELPVTMRYIDARNNQLLSAGIRPE
AFKGLTQLEFLYLSYNRLDFIPIPLPESLRSFHIQHNNIQTMHRDTFCNRHDTTHQRKAL
EDIRLDGNPINLSHFPQAYFCLPRLPTGRMQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcagcccctgatctgtctagcgctagcactgtccctgctggaggtgtgtctg
tgcgccccgcccagggaaaactaccacctcactggcgagacagactgggagaacattgac
ctcaacaactatggggacctgtatgactacgaggacctggagagcgtggtgggagagaga
gagagaattgaagttgggacagtagcaccacctcccaaagtcacaccggccagtcagaac
gtgccaccgcctgaaactccacctccagacctggaagaggaggtgcctcttcgccctcga
tccacgaccccaccccccagactggactttgccggaccaggactgttcggaccacagact
ggactgggcttgccaacctgcctgctgtgtgtgtgtctcagcacttctgtttactgcgac
gatgtggaccttgagtacgttcctccgctgcccaaagacaccacctacttctacgcccga
ttcaataagatcacgcgagtcggtgacaacgactttctcaacctaaacaagctgaagcgc
attgacctgactggaaaccacatcacagagctggacgaggatgccttcctgaagctgccc
gcactgcaggagctcctgcttgcagagaacaagatccggtcgctgccagagctgccagtc
accatgcgatacatcgacgcccgcaacaaccagctcctcagcgcaggcatccgtccggag
gccttcaagggtttgacgcagttagagttcttgtacctatcttataaccggcttgacttc
attcctataccgcttcctgagagtcttcgaagttttcatattcagcacaacaacatccag
acgatgcacagagacacgttctgcaaccgccacgacaccactcaccagcggaaggcgctg
gaggacatccgcctggatggcaatcccatcaacctcagccacttccctcaagcgtacttc
tgcctgccgcgcctccccacagggagaatgcagtga
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