Polyodon spathula (Mississippi paddlefish): 121300760
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Entry
121300760 CDS
T07273
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121300760
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121300760
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
SPESP1
Motif
Other DBs
NCBI-GeneID:
121300760
NCBI-ProteinID:
XP_041085486
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All DBs
Position
26:12992865..13572877
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AA seq
513 aa
AA seq
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MANQSGNAEDAIRVKNRHVKLRREDAEDSQPEAKRVRLGNCEEGISVNETELQCSTNGGQ
PLQRTEEIPLQSTADIKTPLVSLPASKHQILTGACSGSSQKPEDTVDDPKADCSGCIDKE
DSTIPRQQMSCDREQLRGNQDATAPPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPDY
TGQTTVPEHTLNMYPPTQTHTEHSGPDTNAQTVSGTATQTDDAAQTEGQQQTQSSENSEN
KTQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA
REKLHGTVVEGRKIEVNNATARVMTNKKPVNPYANGWKLNPVVGAVYSPEFYAEYGSNCL
RALGHELVPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVFQEPVY
GNKLLQGGYTAYRYAQPATATAAAYSDSYGRVYAADPYHHTLAPAATYSVGAMNAFAPLT
DAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccagtctggcaacgcggaggacgcgattcgagtgaaaaacagacatgttaag
ctgaggagggaggacgcagaagattctcaacccgaagctaagagagtcagactggggaac
tgcgaagagggaatcagtgttaacgaaacagagctgcaatgtagtacgaatgggggtcag
ccgttacagagaacagaagaaatcccacttcaatcaactgctgatataaaaactccactg
gtgagtctacctgcaagcaagcaccagattttaactggagcttgctccgggtccagccaa
aaaccagaagacactgttgatgatcctaaagctgattgtagcggctgcatagataaagaa
gacagcacaattccaagacagcaaatgagctgtgacagagagcaactaaggggtaatcag
gacgccacagcacctcctgacacgatggcacagccttacgcttcagcccagttcgcaccc
ccccagaatggcatccctgctgagtacacagcaccccacccccatcccgcgccagactac
acaggccagactacagtccctgagcacacactaaacatgtaccctcccacccagacgcac
accgaacatagcggccctgacacaaacgcacagaccgtctccggcacagccacacagaca
gatgatgcagcacagactgaaggccaacaacagacgcagtcctccgaaaactcagaaaac
aagacacagccgaagcggctccatgtttcaaatatccctttcagattcagagatccagac
ctcaggcaaatgtttggtcaatttggtaaaatattagatgttgaaattatctttaatgag
cgtggatcgaagggatttggtttcgtaactttcgaaaatagtgctgatgcggacagggcg
agagagaaattacacggcactgtggtagagggccgtaaaatagaggttaataatgccaca
gctcgagtaatgacaaacaaaaagccagtcaacccttatgcaaatggctggaagttgaat
ccagtggtgggtgcagtgtacagtccagaattctatgcagaatacggttctaattgtctc
cgtgcactgggccatgaactggtgccaggcttcccatacccagctgcaactgcagccgct
gcctacagaggagcccacctaagaggccgggggcgcaccgtctacaacacctttcgtgca
gctgcgcctcctccccctatcccagcctacggaggagtagtttttcaagagcctgtgtat
ggcaataagttactgcagggtggttacactgcctaccggtatgctcagcctgccactgca
actgcagctgcctacagtgacagttacggacgagtttatgctgcagacccctaccaccac
acacttgctccagcagccacctacagcgttggtgccatgaatgcttttgcacccttgact
gatgccaagactaggagccatgctgatgatgtcggtctcgttctttcttcattgcaggct
agtatataccgagggggatacagccgttttgctccatactaa
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