Polyodon spathula (Mississippi paddlefish): 121300861
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Entry
121300861 CDS
T07273
Name
(RefSeq) paired amphipathic helix protein Sin3b-like isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121300861
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121300861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
DUF3385
Motif
Other DBs
NCBI-GeneID:
121300861
NCBI-ProteinID:
XP_041085737
LinkDB
All DBs
Position
26:complement(2158691..2205811)
Genome browser
AA seq
1170 aa
AA seq
DB search
MAKIQANLQQISQLQEQAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFGNDPGIYNKFL
DIMKEFKSQSIDTPGVISRVSQLFHGHTDLVLGFNAFLPPGYRIEIPKNGVVSLHSPLSA
QVSPSPVKNTAAAAPVLSAAASTLSETTWSHSEGTNSMCNPTEYQRKPTSPPLCKEKESQ
PPPPTLPLPQPSATSPSPDPSPIEFDSAISYVNKIKNRFLDHPEIYRSFLEILHTYQKEQ
LDVKESKGRAGSGMTEDEVFSKVASLFKGQEDLLSEFGQFLPDAKRSLFTGSGLTGKDHF
KKMEEGEDISKHSRKRVRPMLMPQVKKKMKLCTKEQSYASAGKHGVLREFTFFDKVRRLF
KSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELFAQFKSFLGDKELSHAPTLL
ADRYTEGNGRDIDYASCKRLGSSYRALPKTYQQPKCTGRTAICKEVLNDIWVSFPSWSED
STFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLSPEDQEKFRLD
ECLGGTSEGIHRRAVYRIYGDKASEIIEGLKKNPANAVPVVLKRLKAKEEEWREAQQGFN
KIWREQYEKVYLKSLDHQGVHFKQNDIKALRSKSLLNEIESVYDERQEQSVEEGSLTSSK
PHMVYLYEDKQILEDAAALIIYHVKRQPTIQKEDKDHIKRILQHFVPDLFFSKRGELSES
EDSTDEELESQDLARGPELNGEPRRRHCGSPRSTSAFGGEKLDLRDSEAEHQKNLDGVYN
LIFMNNNWYFFLRLHQILCSRLLRVYQQAERQLLQHRADKEREKELADGRKEKISDLAME
LRLKQPSEVELEEYYPAFLHMVRSLLDGNLDSMQYEDTLREMFTIHAYVGFTIDKLIHNI
IRQLQHLVSDDVCLQVVELYLSERRRGAAGGSLTSQCVRAGWETSYQWKAERTMADENCF
KRLSQVMFMQSKGQVTMTIELLDTEESQTDDPLDVQHLASYMEQYVGAEAAQCHHMEGFY
FKPVFLPRNLRKFRKWQIKQITAMKSRRAWQLGLGVESASNLDCRFKLNTHKMVFVMNSE
DYMYRRGALVKARKSQYMVAQTQHQRFGEWHQKWLSQNVTSEMDTVVQDWLMGEEEQEMV
PCKTTRETLHVNGIPVHRYQVDYSKQPPSP
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattcaagctaatctacagcaaataagccaactccaggagcaggcctacgtg
gtacaaaaacaagtgcaacagcaacacttccaaaaactgaaggtggaagatgctttgtcc
tatctggaccaggttaaaatcagatttggaaatgatcctgggatatacaataagtttctt
gacataatgaaagagttcaagtcacagagcatcgacacacctggtgtgatcagccgagtt
tctcagctgttccacgggcacaccgaccttgtgctgggtttcaatgccttcctccctcca
ggatataggattgaaatccccaagaacggagtcgtctctctgcattctcctctgtcagcc
caggtgtctcctagtcctgtaaagaatactgctgctgctgcccctgttctgtctgctgca
gcttccaccctcagcgagaccacctggagccacagcgagggcaccaactccatgtgcaac
cctacagaataccagcggaagcccacctcccctcctctctgcaaggagaaggagagccag
cccccacccccaacactgcctctcccccagcccagcgccacgtcccccagtcctgacccc
agccccatcgagtttgacagcgccatcagctacgtcaataaaatcaagaaccgctttctc
gaccaccctgaaatatacaggtcttttctggagatactccacacctaccagaaagaacag
ttagatgtgaaggagtccaagggaagagctggcagtggaatgacagaggatgaggttttc
tctaaagtagccagtctctttaaaggacaagaggacttgctgtcagagttcggacagttc
ctccctgacgctaaacgatccctgtttactggaagcggattgacaggaaaagatcacttc
aagaaaatggaagagggagaagacatttcaaaacacagtagaaagagagttcgaccaatg
ctgatgcctcaggttaagaaaaaaatgaagctgtgtacaaaagagcagtcgtatgcatca
gctggaaaacacggtgttctccgggagttcactttctttgacaaggtgcggaggttattt
aagagccaggaagtgtatgagaactttttgcgctgcattgctctctttaaccaggaggtg
gtgtctggggctgagctcctgcagcttgtaactccattcctgggtaaattccctgaactc
tttgctcagttcaaatctttcctgggtgataaagagctttcacatgcaccaacccttctg
gccgatcgctacacagagggcaatggcagagacattgattatgcttcctgtaaaagactg
ggctccagttacagggctctgccaaaaacctaccagcagccaaaatgcacaggcaggacg
gcaatctgcaaagaggtgttaaacgacatctgggtttctttcccctcctggtctgaagat
tcaacatttgtcagctcaaagaaaaccccgtatgaggagcagctgcaccgatgtgaagac
gagcgctttgagcttgatgtggtgttagagaccaatcttgccacgatccgggttttggaa
agtgttcagaagaaactgtcccgcctgtccccagaagaccaggagaagttccgcttggac
gagtgtctgggcgggacttccgaagggatccaccgcagagcagtgtaccggatctacggg
gacaaggcctcggagatcatagaggggctgaagaagaacccggccaacgcagtgcctgtg
gtgctgaagagattgaaggcgaaggaggaggagtggcgagaggctcagcagggctttaat
aagatctggcgtgagcagtacgagaaagtgtacctcaaatccctagaccaccagggagtc
catttcaaacagaacgacatcaaggctctccgctccaaaagtttactcaatgaaattgaa
agcgtgtatgatgagcggcaggagcaaagcgtggaggagggcagcctgaccagcagcaag
ccacacatggtgtatctgtacgaggacaagcagatcctggaggacgcagctgccctcatc
atctaccacgtgaagcgccagcccaccatccagaaagaagacaaggaccacatcaagaga
atcctgcaacactttgtccctgacctcttcttttccaaacggggtgagctcagcgagtcg
gaggactccaccgatgaggagctcgagagccaggacctggcccgggggcccgagctgaat
ggagaacccaggaggaggcactgcggctctcctcgcagcaccagcgccttcgggggggag
aagctggacctgcgagacagcgaggcggagcatcagaagaacttggatggtgtctacaat
ctaatcttcatgaacaacaactggtacttcttcctgcggctgcaccagatcctgtgctcg
cggctgctccgggtttaccagcaggcggagaggcagctcctgcagcaccgcgccgacaag
gagagggagaaggagctggcagatgggcgcaaggagaagatcagcgacctggccatggag
ctgagactcaaacagccaagtgaggtggagctggaggagtactaccctgccttcctgcac
atggtgcgtagcctgctcgatgggaatctcgactccatgcagtatgaagacactctgcgg
gagatgttcaccatccacgcctacgtggggttcaccatcgataagcttatacacaacatc
atacgacagctgcagcacttggtgagcgatgacgtgtgcctgcaggtggtcgagctgtat
ctgagcgagcggaggcgaggggcggcagggggaagcctcacgtctcagtgtgtgcgcgcg
ggctgggagaccagttaccagtggaaagcagagcgcactatggcagatgagaactgcttt
aagcgtttgtcacaggtgatgtttatgcagagtaaaggccaggtaaccatgacgattgaa
ctgctcgacaccgaggagtcccaaacagatgaccctcttgatgtgcagcacttagcaagt
tacatggagcagtatgtgggtgctgaagcagcccagtgtcaccacatggaaggattctac
ttcaaacctgtctttctaccaagaaatcttcggaagttcaggaagtggcagattaaacag
atcactgcgatgaagagcaggagggcctggcagctgggtctgggggtggagagtgccagc
aatctggactgtaggttcaaactaaacacgcacaaaatggtgttcgttatgaactctgag
gactacatgtacagacgaggagccctggtgaaagccagaaagtcccagtacatggttgct
cagacccaacaccagcgcttcggagagtggcatcagaagtggctgtcccagaacgtgact
agcgagatggacactgtggtacaggactggttaatgggggaagaggaacaggaaatggtt
ccatgcaaaaccacgcgtgagactttgcatgtcaatgggatcccagtacacagataccag
gtggactacagcaagcagcccccttcaccgtga
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