Polyodon spathula (Mississippi paddlefish): 121301435
Help
Entry
121301435 CDS
T07273
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like isoform X1
KO
K06751
MHC class I antigen
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
pspa04145
Phagosome
pspa04218
Cellular senescence
pspa04514
Cell adhesion molecules
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121301435
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121301435
04145 Phagosome
121301435
09143 Cell growth and death
04218 Cellular senescence
121301435
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121301435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121301435
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121301435
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121301435
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Antigens
121301435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Psg1
MHC_I_3
DUF6479
Siva
Motif
Other DBs
NCBI-GeneID:
121301435
NCBI-ProteinID:
XP_041086762
LinkDB
All DBs
Position
27:complement(548058..560533)
Genome browser
AA seq
379 aa
AA seq
DB search
MIGMTVLWILCWVHAAAAGTHSLSSLRVVTIDGTELAEHVAVGMVDDVKYYSYNSTVGKL
APLFDWINTTQGREFWERTSWHHLLGHDVFKWSVRNLVQHFNRTGVHIFQHVGRCELDDD
GTKRGQLYQAYDGKDFVSFDVDTMSWVAAVPQARIYKHKRETDTLSQQIYSDYYQQQCFE
LLKTFLQNGKETLQRKVRPEVSVIQRKAPRSAGTEVLCHVTGFYPREVDVSWVRDRETVL
EEGVWSEEVLPNGDGTYQLRKTLTVSAEDQEKRSYSCQVDHSSLEEAMNVKWVPQAARHT
WLVAVGVPVAALVLIAVFIRVITWKKRTAGVPFSCCSAPLPREDEQDSAAAVPLSSTAGA
AEGQAEGQESLTGAPPSLC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatcggaatgacggtactctggattctgtgctgggttcatgcagccgccgcaggaact
cattcgctgagttctcttagagtggtgactatagatggcactgaactcgcagagcatgta
gctgtggggatggtggatgatgtgaagtactactcctataacagcactgtggggaaactt
gcccccctcttcgactggatcaataccactcagggacgcgagttctgggaaagaacttct
tggcatcatctgcttggtcatgatgtcttcaaatggagtgtaagaaatctagtccagcac
ttcaaccgtactggggttcacattttccagcacgtcggtcgctgcgagctggatgatgac
gggaccaagcggggacagttgtatcaagcgtatgatgggaaggattttgttagttttgat
gtcgacaccatgagctgggtcgctgcagttccccaggctcgcatctacaaacacaagagg
gaaacggacacactcagtcaacagatctattctgattattatcaacagcagtgttttgag
ttgctgaagacgtttctccagaatgggaaggagaccctgcagaggaaagtccggcctgaa
gtgagtgtgattcagaggaaggctcctcgctctgcaggaacggaggtgctctgtcatgtg
acagggttctacccgcgagaggtggatgtttcctgggtgagagacagggagacggtgctg
gaggaaggggtgtggagtgaggaggtgctccccaatggggacgggacctaccagctgaga
aagaccctgacagtgagcgctgaggaccaggagaaacgcagctactcctgccaggtggac
cacagcagcctggaggaggcgatgaatgtgaaatgggttcctcaggctgctcggcacaca
tggcttgttgctgttggtgtcccggttgctgctctggttctgatcgcagtctttatccga
gtcatcacctggaagaagagaacagcaggagtccctttctcctgctgctccgcaccgctc
ccccgggaggatgagcaggactctgcagccgccgtgcccctgtcttccacagccggggca
gctgaggggcaagctgagggccaggagagcttgactggagctccaccctcactgtgctag
DBGET
integrated database retrieval system
