Polyodon spathula (Mississippi paddlefish): 121302417
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Entry
121302417 CDS
T07273
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121302417 (rbfox1l)
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121302417 (rbfox1l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
121302417
NCBI-ProteinID:
XP_041088309
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All DBs
Position
29:2298284..2322097
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AA seq
372 aa
AA seq
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MLSSQAVVLHPYGLPVYPQPPSCYSGLVQGAPPGSDGGSSSADPSLTTAYGPPPAYPPAQ
APPTMQGPRLPMEFSPAHPSVLGVEFQEHGLRMYQPGPPPSLPEQNTDTNPPSNTQQEDS
AQLDLSQNAAGQEDDSSKPQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS
KGFGFVTFESSLEADSARDKLNGTIVEGRKIEVNNATARVVTKKPQPPLINAGWKINPMV
GAVYAPELFTMASFPYPVAPPTLAYRGAALRGRGRAVYNTIRSATGATPTPVPAYPGLVY
QDGLYGAEVYGGYPAYRVAQPASATTTYSDGYGRVYTTAPDPYHHTVGPTATYGVSTVAS
LYRGGYNRFTPY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgctttcctctcaggctgtcgttttgcacccttatggacttcctgtctacccccaacct
ccttcctgttattccggacttgtccagggtgctcccccaggttcggatggtggctccagc
tctgctgacccctccctgaccacagcctatggcccgccccctgcctaccctcctgcccag
gctcctcccaccatgcagggtccccgcctccccatggagttcagccccgcccacccttct
gtcttgggggtggagtttcaggagcatgggctcagaatgtatcagcccggcccgcccccc
tcgctgcctgagcagaacactgacaccaaccctcccagcaacacgcagcaggaggactcc
gctcagttggacctatcccagaatgccgcagggcaggaggacgacagcagtaagcctcag
cccaagcgtctgcatgtgtccaacattccttttcgattccgagacccggacctgagacag
atgttcgggcaatttggaaaaattctcgatgttgaaatcatctttaatgaaaggggatca
aaggggtttggtttcgtcacgtttgaaagcagtttagaagcggacagcgctcgggacaaa
ttaaacggaaccattgtggaaggaagaaagattgaggtcaataatgcgacagcgagagtc
gtcacaaagaaacctcaaccccctctgatcaacgctggttggaaaatcaatccaatggtg
ggagcagtttacgcccctgagctgtttaccatggccagtttcccctatccagtagccccg
cccaccctggcttacagaggtgccgccctcagggggcgtggcagggcagtctacaacaca
attcgctcagccactggggccacgcccactccagtccccgcctacccaggtcttgtctac
caggatggactctatggtgcagaagtctatggaggttaccctgcctaccgtgtggcccag
ccggcctctgcaacgacaacctacagtgacgggtacggtagagtgtacaccacagctcca
gatccctaccaccacactgtgggacccaccgccacgtacggagtcagcacagtggccagt
ctgtatcgaggaggttacaatcgattcaccccctactga
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