Polyodon spathula (Mississippi paddlefish): 121304808
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Entry
121304808 CDS
T07273
Name
(RefSeq) metastasis-associated protein MTA1-like
KO
K11660
metastasis-associated protein MTA
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121304808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121304808
03036 Chromosome and associated proteins [BR:
pspa03036
]
121304808
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121304808
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
121304808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
Myb_DNA-binding
GATA
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121304808
NCBI-ProteinID:
XP_041092139
LinkDB
All DBs
Position
40:complement(1487518..1506649)
Genome browser
AA seq
696 aa
AA seq
DB search
MAANMYRVGDYVYFENSSSNPYSVRRIEELNKTANGNVEAKVVCFYRRRDIPSNLIALAD
KHSKELEEEIEGESLQQLTERQIHQLKHRELFLSRQLESLPATHIRGKCCVTLLNETEAL
FSYLDKEDGFFYGLVYDPQQKTLLADKGEIRIGPRFQADITDLLKEGETDDRDQTELETK
IWEPESPLTDQQIGQFLVIARSVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDT
LHRCSYDMSCAISALVPQGGPVLCRDEMEEWSASEANLFEEALEKYGKDFADIRQDFLPW
KCLPSIVEYYYMWKTTDRYVQQKRLKAAEAESRLKQVYIPNYNKPNPNQISGNSVKPGMV
NGSGSLGQNSCAGRACESCYTTQCSQWYSWGPPSMQCRLCSPCWNYWKKYGGLKMPTRLE
GEKLGPSRNSMSPFGYWVKNANPKYTLKTKQAFYLQTSTLTRVARQLCLAHLQPRRAARR
PFVPVNSVEIKAQCLETLPDGARKLVKMRPMVRKPLESIVQYMGLHPYVKPEPVKSAISL
GSASVTRVVPVINHGSTTILGKRSYEQHNGAEGNMKKRLLMPSRGLPNHSQVRQLARLNK
SYLLNGKPYERPQRVMKHGSLPPLKGRRMNWIDAPDDVFFMATEDIRKVRKLLASFDIKR
AARQPYKQIIKQIESELDVPSQLRHLANEEPIVIED
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaacatgtacagggtaggagattatgtttactttgagaactcttccagcaac
ccgtattcagtgagacgaatagaggaattgaataagactgcaaatggaaacgtggaagcc
aaagtggtctgtttctacaggagacgagatatccccagcaacctcattgcgctggctgac
aaacactcaaaggagctggaagaggagattgaaggggagagtttgcagcagctgactgag
agacagatacatcagctgaagcacagagagctcttcctgtccaggcagctggagtcactg
ccagccacccacatacgcgggaaatgttgcgtcactctgctgaatgaaacagaagcatta
ttttcctacctagacaaagaggacgggttcttctacggcctggtctatgatccacaacag
aagacactgttggcggacaagggcgagattcgaattgggccgcgattccaagccgatatc
acagacctcctgaaagaaggtgagactgacgatagggatcagacagaactggaaacaaag
atctgggagccggagagtccactaactgatcagcagataggccagttcctggttattgca
cgttctgttggtacctttgcccgtgcactagactgcagcagctccatcagacagcccagt
ctgcacatgagcgctgcggctgcatccagagacatcaccctgttccatgccatggacacg
ctgcaccggtgcagctatgacatgtcgtgcgcgatctccgctctggtgcctcaggggggg
ccggtgctgtgccgagacgagatggaggagtggtccgcttccgaggcaaacctcttcgaa
gaggcgctggagaaatatggcaaggacttcgctgacattcgacaggactttctaccatgg
aaatgcttacccagtattgtagaatattactacatgtggaagaccactgacagatatgtg
caacagaaacgtttaaaagcggccgaagcagaaagcaggctgaagcaagtttacatccca
aactataacaagcccaacccgaaccagattagtgggaacagtgtgaagcccggcatggtg
aatgggtctggatcactgggtcagaacagctgtgcgggccgagcctgtgaaagctgttac
actacccagtgctctcagtggtactcctggggtcctcccagcatgcaatgcaggctgtgt
tccccctgttggaattactggaagaagtacggtggcctgaagatgccaacaagactggag
ggtgagaagctggggcccagtaggaacagcatgagcccttttggatactgggtaaagaac
gccaaccccaaatacacactgaagaccaagcaagcgttctacctccagactagcacgctg
acaagagtcgcacggcagctgtgcctggcccacctgcagcctcgccgggcagctcggagg
ccctttgtgcctgtcaacagcgtggagatcaaagcacagtgtttggaaacactgcctgat
ggagcaagaaagttagtgaaaatgaggccaatggtgaggaagcccttggaatcaatcgtg
cagtacatggggctgcacccctatgtaaagccagagccagtcaagtctgccattagcctg
ggcagtgccagcgtgacaagagtggtcccggtcatcaatcacggctccaccaccatcctg
ggcaagcgcagttacgagcagcacaacggagctgaaggaaatatgaagaaaaggctactg
atgccatctagaggtttgccaaaccacagtcaagtgcgacaactggccaggctcaataag
agttacctgctgaatggaaagccctacgagagaccccagcgtgtgatgaagcacggctct
ctaccacctctcaagggccggaggatgaactggatcgacgctcccgacgacgtgttcttc
atggccactgaggacatcagaaaagtccgcaaactcctggcttcatttgatatcaagaga
gcagccaggcagccttacaaacaaatcatcaagcagattgaatccgagctggatgtcccg
tcacagcttcgacacctggccaatgaggagcccatcgtcattgaagactaa
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