Polyodon spathula (Mississippi paddlefish): 121305399
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Entry
121305399 CDS
T07273
Symbol
hexb
Name
(RefSeq) beta-hexosaminidase subunit beta isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00511
Other glycan degradation
pspa00513
Various types of N-glycan biosynthesis
pspa00520
Amino sugar and nucleotide sugar metabolism
pspa00531
Glycosaminoglycan degradation
pspa00600
Sphingolipid metabolism
pspa00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pspa00604
Glycosphingolipid biosynthesis - ganglio series
pspa01100
Metabolic pathways
pspa04142
Lysosome
Module
pspa_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
121305399 (hexb)
09103 Lipid metabolism
00600 Sphingolipid metabolism
121305399 (hexb)
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
121305399 (hexb)
00531 Glycosaminoglycan degradation
121305399 (hexb)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
121305399 (hexb)
00604 Glycosphingolipid biosynthesis - ganglio series
121305399 (hexb)
00511 Other glycan degradation
121305399 (hexb)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121305399 (hexb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121305399 (hexb)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
121305399 (hexb)
Chaperones and folding catalysts [BR:
pspa03110
]
Intramolecular chaperones
Others
121305399 (hexb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
DUF4248
Motif
Other DBs
NCBI-GeneID:
121305399
NCBI-ProteinID:
XP_041092965
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All DBs
Position
2:complement(100712618..100726041)
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AA seq
544 aa
AA seq
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MAVMNLAVLLLAASVCFCSRHKSEKVPKLVNSQYGSLWPLPQSAQISVTAFQLSRSGFQI
VHAPKSSAGPRCYLLGEAFRRYFEYIFGYSKRQNKDRKQSGAGAEVSELQVLITSSAPQC
DGYPSVSSDESYQLTVDQPTAVLTAPEVWGALRGLETFSQLVYKDEYGTLHINRSEIKDF
PRFNHRGILMDSSRHFLPLKVILANLDAMAMNKYNVFHWHIVDDQSFPYQSPLFPELSKK
GSYHPYTHVYTPTDVKMVIEFARMRGIRVISEFDTPGHTQSWGLGQKGLLTPCYSGEKPS
GTFGPVNPILNSTYDFMTQFFKEVSSVFPEAYIHLGGDEVDFSCWKSNPDIQKFMEQQGF
GSDYSKLESYYIQRILDIVTGTRKGYMVWQEVFDNGVKLKLDTLIHVWKGSEEQYKAEMA
AVTAAGFQALLSTPWYLNRISYGQDWQQSYKADPHSFNGTDAQKKLVIGGEACLWGEFVD
ATNLTPRLWPRASAVAERLWSDKDVRDIDDAYSRLSQHRCRMVQRGIPAEPLFVGHCDYE
YGGL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaatgaatctcgctgtcctgcttcttgccgcttctgtttgtttttgttccagg
cataaatcggagaaagttccgaaacttgtgaattctcagtacggctctctttggccgttg
ccgcagtcagcgcagatctctgttactgcattccagctcagccgctccggtttccaaata
gtccatgcgccaaaatcatcggctggcccaagatgctacctcttaggagaagcgtttcgg
aggtattttgaatacatcttcggatattccaaaaggcagaacaaagacaggaagcagtca
ggagctggtgcagaagtttctgagctgcaggttttaatcacatccagtgcgccgcagtgt
gacggctaccccagcgtgagctctgacgagtcctaccagctcactgtggatcaacctaca
gctgttctgacagctcctgaagtgtggggcgcactgcgaggactggagacattcagccag
ctggtgtataaagatgaatatgggacgcttcatatcaacaggtctgagatcaaagatttc
cccaggttcaaccatcgagggattttgatggattcatctcggcatttcctgcctcttaaa
gtcattctagcaaacttggatgccatggctatgaacaagtataatgtctttcactggcac
attgtggatgatcagtccttcccttatcagagcccccttttccctgaactgagtaaaaag
ggctcgtatcatccatacacccacgtctacactcccactgatgtaaagatggtgattgaa
ttcgctaggatgagaggaatccgtgtcatctccgagtttgacacaccgggacacacacag
tcctggggtttgggtcagaaaggcctcctgactccctgttactccggagagaaaccttct
ggcaccttcgggcctgtcaaccccatcctgaacagcacctacgacttcatgacacagttc
ttcaaggaggttagctctgtgtttccagaagcctacatccacctgggaggagatgaggtg
gatttcagctgctggaagtcaaatcccgatatacagaaatttatggaacaacaaggcttt
ggctcagattacagcaaattagagtcttattatatccagaggattctggatattgttact
ggtactagaaagggctacatggtttggcaggaggtatttgacaatggagtgaagttaaag
ttagacacccttatccatgtgtggaagggcagcgaggagcagtacaaggcagagatggca
gctgtaacagcagccgggtttcaagccctgctttccaccccctggtacctgaaccgcatc
tcatacggacaggactggcagcagagctacaaagctgacccgcacagtttcaatggaacg
gacgcacagaagaagcttgtgattggtggagaggcttgtctttggggagaatttgtggat
gcaacaaatctcactccaagactgtggcctcgtgccagtgctgtagctgagaggctgtgg
agcgacaaagacgtgagagacatcgacgatgcctacagtcgtctgagccagcaccgctgc
cgcatggttcagcgtggaatacctgctgagcccctctttgtagggcactgtgattatgaa
tatggtggcctgtga
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