KEGG   Polyodon spathula (Mississippi paddlefish): 121305503
Entry
121305503         CDS       T07273                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 5C-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pspa01009]
    121305503
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pspa03036]
    121305503
Enzymes [BR:pspa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121305503
Protein phosphatases and associated proteins [BR:pspa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121305503
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121305503
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD PHD_4 zf-PHD-like
Other DBs
NCBI-GeneID: 121305503
NCBI-ProteinID: XP_041093077
LinkDB
Position
43:3334676..3354592
AA seq 1627 aa
MESDEFVPPPECPVFEPTREEFADPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVDVDN
FRFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNIERRILDLYSLGKIVMEE
GGYDTVCKERRWVRVAQRLGYPPGKNIGSLLRSHYERIVYPFEMFQSGGNLTFKPRQLYD
SEDKDKEYKPHSIPLRQSVPPSKIISLGRRANRVQPDPEPTEEDIEKNPELKKLQIYGAG
PKMMGLGLVPRDKALRKKDDLPQTLVVKDSVGVKEEPLSPPAGADEDLKPSGDSLQPDVK
PESPSQEEPCTKMTMRLRRNQTNTQIVDSFVCRMCARGDEDDKLLLCDGCDDNYHTFCLL
PPLSETPKGDWRCPKCVAEECTRPAEAFGFEQATREYTLQSFGEMADAFKADYFNMPVHM
VPTELVEKEFWRLVSSIEEDVTVEYGADIHSKDFGSGCEEDLPQEGPPPPGGPPRFGGGA
GLEEGRDWRRRSGEPRCDLVTLTMIAALSLSLTQEYAHSGWNLNVMPVLEQSVLCHINAD
ISGMKVPWLYVGMVFSTFCWHIEDHWSYSINYLHWGEPKTWYGVPSSSAERLEEVMKKLT
PELFESQPDLLHQLVTIMNPNILMGYGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAE
AVNFAAADWLPAGRRCIEHYRRLHRYCVFSHEELTCKMAACPERLDLNMAIAVHKEMFIM
VQEERKLRKALLDKGITEAEREAFELLPDDERVCDKCKTTCFLSALACYSCPERLVCLNH
MDELCACPPERHYLRYRYTLDELPTMLHKLKLRAESYDTWAGKVKQALDMEDGRKRVVEE
LRALCSEAADKKFPDNELLHRLRGTISEAERCVSETAALLGKTRSQAGLPKMTVAELKTF
LDQMLALPCVLSQIPEVQAVLSVAEMYQRSAQALLQGATLSPADPSQIQALLEQGSVLAV
EAPELEQLRGLLEQGRWLGEVKRALASTGSLVTLEVMRSLMEAGCSVPQSAAVEKAMAEL
QELLTIAESWEEKAGICLEARQKHPPATLEAIIKEARNIPVQLPNILALSEALSKARAWT
ADLEEIQNGEHFPCLDDLEGLVAIGRDLPVHMEELRHLELQVVTAHSWREKASKTFLKRN
SCYSLLEVLCPCADASSDSVKRSKWRRRVGRGRGRGRGRERERGERDCSLLYKSDIDSLG
LSAQDLRDPGSIVSAFKQGEQKEKEGIRRLQETCQALPRLXRAEREGRNRRRVGQVRDGA
APPPSTSGGTSRRGGGGDPQLPPPPPSPAPHSCVCGAPPRPPMLRCQLCRDLFHSGCVSF
PKLLPQTSPSPAASSPPSPALCWWDWDSRFLCPLCQRSRRPRLETILALLVALQRVPVRL
PEGEALQCLTERAINWQSRAAAALASPELQGALEKLTQLQDRLARRDKAGTGGHGSAGNG
HGEDRTERGDGHSEDDSREGGKEEAEERTNTAAEERRGESSQENGHSRTGNGSSGVTDIE
QLHALLPLLEGPVIELSPQARSELEELQTEGDLLEVSLDQSQSIWRVLQAAQSPPLDTLT
TIIEAQRLESRPGGRVRAKESDKRRKRKCDRGGGEGLLPVSGDGFENKKTRAGMAEPRHS
SNGVGIL
NT seq 4884 nt   +upstreamnt  +downstreamnt
atggagtcggacgagttcgtgcccccgccggagtgtccggtttttgagccgacccgggag
gagttcgcagacccgctggggtacatcgccaaaatccgccccatcgcagagaaatcgggg
atctgcaagatcaggcccccggcggactggcagcccccctttgcagtggatgtggataac
ttcaggttcactccccgaattcagaggctcaatgagctggaggctgagactcgtgtgaag
ctgaactatctggatcgcatcgcaaagttctgggagatccaggggtcctctctgaagatc
cccaatattgagagacgcatcctggacctctacagcctgggcaagatagtgatggaggag
ggaggctacgacactgtgtgtaaggagcggcgctgggtgcgagtggctcagagattgggg
taccccccgggcaagaacatcggctccctgctgcgctcccactacgagaggatcgtgtac
cccttcgagatgttccagtcggggggcaatctcacgttcaagcctcggcagctgtatgac
agtgaagacaaagataaggagtacaaaccccacagcatccccctgcggcagtctgtacct
ccctccaaaatcatcagcctggggcgccgggccaaccgggtgcagcctgaccccgagccc
acagaggaggacattgagaagaatcctgagctgaagaagctgcagatctacggagccggg
cccaagatgatgggcctgggactggtgccccgagacaaggccctaaggaagaaagatgat
ctcccccagactctggtggtgaaggacagtgtgggggtgaaggaagagcccctctcccct
cccgcgggcgctgacgaggacctgaagccctcgggggactccttgcagcccgacgtgaag
ccggagagccccagccaggaggagccctgcaccaagatgaccatgcgactgcgacgcaac
cagaccaacacacagattgtggactccttcgtgtgtcggatgtgcgctcgcggggatgaa
gatgacaagctgcttctgtgtgatggttgtgacgacaactaccacaccttctgcctcctg
ccccccctctccgagacccccaagggggactggcgctgccccaagtgtgtggctgaggag
tgcacccgccccgcagaggcttttggtttcgagcaggcgacgcgggagtacacgctgcag
agcttcggagagatggccgacgccttcaaggcggattacttcaacatgcccgtccacatg
gtccccacagagctggtggagaaggagttctggcggctggtcagcagcatcgaggaggac
gtgacggtggagtatggagccgacatccactccaaggactttggcagcggatgtgaggag
gaccttccacaggagggccctcctcctcccgggggaccacctcgctttggaggaggggcg
ggactggaggaggggcgggactggaggaggaggtctggagagcctcgctgtgatttggta
acgctaactatgattgctgctctctctctctcgctcactcaggagtacgcccacagtggc
tggaacctcaacgtcatgcccgtgctggagcagtccgtgctgtgtcacatcaacgctgac
atctcgggcatgaaggtgccctggctctacgtgggcatggtcttctcaaccttctgctgg
cacatcgaggaccactggagctactccatcaactacctgcactggggggagcccaagacc
tggtacggggtcccctcgtcctccgcggagcgcctggaggaggtgatgaagaagctgacc
cccgaactgttcgagagccagccagacctgctgcaccagctcgtcaccatcatgaacccc
aacatcctgatggggtacggggtgccggtggtgcgtaccaatcagtgtgcgggggagttt
gtgatcaccttccctagggcttaccacagtggcttcaaccaagggtacaactttgcagag
gcagtgaacttcgctgccgcagactggctcccggcaggacgccgctgcattgagcattat
cgccgcctgcatcggtactgcgtgttctctcacgaggagctcacctgcaagatggcggcc
tgcccggagagactggacctcaacatggccatcgcggtgcacaaggagatgttcatcatg
gtgcaggaggagaggaagctgaggaaagcgctgctggacaagggtatcacggaggcggag
cgcgaggcattcgagttgctcccagatgacgagcgggtttgtgacaagtgcaagaccacc
tgcttcctgtcggcgctcgcctgctacagctgccccgagaggctggtctgcctgaatcac
atggacgagctgtgcgcctgtcccccagagagacactacctcaggtatcgatacacgcta
gatgagttgcccaccatgctgcacaagctgaagctgagagcagagtcctacgatacctgg
gcaggcaaggtgaagcaggccctggacatggaggacgggaggaagagagtggtggaggag
ctgagagccctgtgctctgaagctgctgataagaaatttcctgacaacgagctgctgcac
cgtctccgaggaacgatctccgaggcagagcgctgtgtgagcgagactgccgccctgctg
gggaagacacgcagtcaggccggtctgcccaagatgacggtggccgagttgaagacgttc
ctggatcagatgctggcgcttccctgtgtcctctcccagatcccagaggtgcaggccgtg
ttgtctgtggcagagatgtaccagcgcagtgctcaagctctcctgcagggggcgacgctg
tcccctgcggacccctctcagatccaggccctgctggagcaggggtctgtcctggctgtg
gaggcccccgagctggagcagctgaggggtctgctggagcaggggcgctggctgggggag
gtgaagcgggccctggcctcgacggggtcgctggtcaccctggaggtcatgaggtcgctg
atggaggcgggctgcagcgtgccacagagcgccgccgtggagaaagccatggccgagctg
caggagttgctgaccatcgcggagagctgggaggagaaggctggcatctgcctggaggcc
aggcagaagcacccccctgccaccttggaggccatcattaaggaggctcggaacatccca
gtgcagctgcccaacatcctggcactcagtgaggccttgagcaaggcacgggcctggacc
gccgacctggaggagatacagaacggagagcactttccctgcctggatgatctggagggg
cttgttgcgatcggcagggacctgcctgtgcacatggaggagctgcggcacctggagctg
caggtggtgaccgctcactcctggagagagaaggcgagcaagaccttcctgaagaggaac
tcctgctacagcctgctggaggtgctgtgcccttgtgctgatgccagctcagacagtgtg
aagcgttccaagtggagaaggcgggtggggagagggagagggagagggagagggagagag
agggagagaggggagagggattgctccctcctgtataaatctgacatagatagcttgggt
ctgtctgctcaggatctccgggatcctggatccatcgtctctgctttcaaacaaggcgag
cagaaagagaaggaaggaatccggcgactgcaggagacctgtcaagccctgccccgtctt
tagcgagcagaaagagaaggaaggaatcgtcggcgagttggacaggttcgggacggggct
gctccccctccctccacctctggcgggacgtctcgacgggggggaggtggggacccgcag
ctgcccccaccacccccctcccctgccccccactcctgcgtgtgtggggcccccccgcgg
ccccccatgctccgctgccagctctgcagagacttattccacagcggttgcgtttctttt
cccaaactcctcccccagacctcccccagccccgccgcctcctctcctcccagtccggcg
ctgtgctggtgggactgggattccaggttcctgtgcccgctctgccagcgcagtcggcgc
cccagactggagaccatcctggccctgctggtggctctgcagcgtgtccctgtgcgcctg
ccggagggagaggcactgcagtgcctgaccgagagggctatcaactggcagagccgcgct
gcggccgcgctggcctcccccgagctccagggggcgctggagaagctgacgcagctgcag
gacaggctggcccggcgggacaaagccgggacaggcggtcatggcagtgctgggaatgga
cacggtgaagacaggacagagagaggagacgggcacagtgaggacgacagcagggaaggg
gggaaggaggaggcagaagagagaacgaatacagccgcagaagagaggaggggagagtcc
tcccaagagaatgggcactcgaggacggggaatggcagctctggtgtgacagatattgag
cagcttcacgctctgctgcccctgctcgaaggcccggtgatcgagctctccccccaggct
cgctcggagctagaggagctacagacggaaggcgatctcctggaggtgtctttggatcag
agccagtccatctggagagtcctgcaggcagcgcagagcccccccctggacacgctgacc
accatcatagaggctcagaggctggagagtcggcccggggggagggttcgagcgaaggaa
tcggacaagaggaggaagaggaagtgtgatcgaggaggaggagaggggctcctgccagtc
tcgggagacgggttcgagaacaagaaaacgagggcagggatggcagagccacggcacagc
agcaatggagtggggatcttgtga

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