Polyodon spathula (Mississippi paddlefish): 121307339
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Entry
121307339 CDS
T07273
Symbol
ttc5
Name
(RefSeq) tetratricopeptide repeat protein 5
KO
K24928
tetratricopeptide repeat protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121307339 (ttc5)
Membrane trafficking [BR:
pspa04131
]
Autophagy
Other autophagy associated proteins
Others
121307339 (ttc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC5_OB
TPR_11
TPR_2
TPR_1
TPR_17
TPR_16
TPR_8
TPR_19
TPR_14
TPR_9
TPR_12
NatA_aux_su
TOM20_plant
RPN7
TPR-S
Motif
Other DBs
NCBI-GeneID:
121307339
NCBI-ProteinID:
XP_041095449
LinkDB
All DBs
Position
55:469991..500345
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AA seq
444 aa
AA seq
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MAGSATQSETTADEKDEIRYLRELVDALYHFRDHYFETHSVEEANRKQSDVAAEMEKTLR
RLEEMEGSCTDKVVFLLLKGRTLNVGPEFSSQAEDALSRAVKLDPTLVEAWNQLGEVYWK
KGDVSAARTCFSGAQNHCKNKVSLRNLSMVLRQIQTPNEDNSKNVFESVSKAKQAVQLDI
TDGTSWYILGNAYLSLFFSTGQDPKISQLALSAYAQAEKMDSTASSNPDLHFNRATLYKF
EDQFAEALHGFSRAAALDPAWTEPPERERQLLDYLDRLTALISNKGKVKVKRLQSMLGSL
RLTDLRACCDGQYQNSAGQRVKLDRQQLASLKEGVNTGSAVLGRVVFSITPEEKVPFTFG
LVDTEGTCCAVMVYNMAESWGALIGDSVAIPEPNVKLHNLTHKGKTYAFQSIRVYSPLLL
IINGKKQGPNCLASATVTYKPQSD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagcgcaacacaaagcgaaacaaccgcggacgaaaaggacgagattcgttat
ttacgggaactagtggatgcgttgtatcatttccgggaccattattttgagacacacagc
gtagaggaggctaacaggaagcagagcgatgtggcagcagagatggagaagaccttgcgc
cgcctggaggagatggaaggcagctgcacagacaaagtggtgttcctgctcctgaaggga
aggaccctgaacgtggggccggagtttagcagccaggccgaggacgctctctccagggcc
gtcaaactggaccccactctggtggaggcctggaaccagctgggagaggtgtactggaag
aagggggacgtgagcgcggcacggacctgcttctcaggggctcagaaccactgtaagaac
aaggtgtccctgagaaatctctccatggttttgagacagatccagactccaaatgaggat
aattccaaaaacgtgtttgagagcgtcagcaaggccaagcaggcggtgcagctggacatc
acggacgggacgtcctggtatatcctcggcaatgcttacctctctctgtttttctcaact
gggcaggatcctaaaatatcacagctagctctaagtgcatatgctcaagcggagaagatg
gacagcacagccagttcgaaccctgatcttcatttcaacagggctacgctgtataagttc
gaggaccagtttgcagaggctttacacggtttctctagagctgcagctctcgacccagcc
tggacagaaccaccagagagggagagacagctgctagactacctggacagactgactgca
ctcatcagcaacaagggcaaggtgaaggtgaagcggctgcaaagcatgctgggatcactg
cggctgacggatctgagggcgtgctgtgacgggcagtaccagaacagcgcaggccaacgg
gtcaaattggaccggcagcagctggcctccctcaaagaaggggtgaacacgggcagcgca
gtactgggcagagtggtgttcagcatcacccctgaggagaaggtgccattcacatttggt
ctggtggacactgaaggcacatgctgtgctgtgatggtgtacaacatggctgagagctgg
ggagcactgataggagactcagtagcgattccagagcccaacgtcaaactacacaacctc
acacacaagggcaagacctatgcattccagagtattcgggtgtattccccgctgttgctg
attataaatggaaagaaacaaggaccaaactgcctcgcctccgccactgtgacatacaag
cctcagagcgactga
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