Polyodon spathula (Mississippi paddlefish): 121308578
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Entry
121308578 CDS
T07273
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121308578 (tyw1)
Enzymes [BR:
pspa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
121308578 (tyw1)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121308578 (tyw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Radical_SAM
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
121308578
NCBI-ProteinID:
XP_041096980
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MLYWAALILLQLALQVFAVQGGDAAAAEEDFWSSPYYTCFISLWQNRVCIYSVGGVCVAI
WMLLRMSLTKKTEISTMGSGTSSSSHMKENVHSVQKEQEIHVSGVKIFFGSQTGTAKGFA
QDLAKDVETLGLPAEVHDLKGYDPDDSLPDETTSKAVCVFILATYTDGQPTENAEWFCKW
LQEASNDFRYGKSYLKGVRYAVFGLGNSVYVGHYNTVGKNVDKWLWMLSGSRIMTRGQGD
CNVVKSKSGSVEGDFRAWKSMFLSRLQALVKGEKQACSGDCKKGKCKNKKHQHREEKEQN
AGAQEEHSSEEIFETSSEEDSSHEEEASRGSVIDVEDLGNVMNHMKKIKKKNETEVKLSK
QGPVKSEDAEAREMITPALRDALTKQGYRLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYG
IESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEKILQEAIENHQNMIKQFR
NT seq
1441 nt
NT seq
+upstream
nt +downstream
nt
atgttgtattgggcggctttgatcctgttgcaactagcattacaggtgtttgcagtgcag
ggaggggatgcagcagcagcagaagaagatttttggagttctccttattacacgtgtttc
atatcgctatggcaaaacagagtctgcatttactctgtgggaggtgtgtgcgttgctatt
tggatgcttcttcggatgagtctgactaagaagacagagatcagtacaatgggctctgga
acttcatccagcagtcacatgaaggaaaatgtccattcggtccagaaagagcaggagatt
catgtttcaggggtgaagatattctttgggtctcaaactggaacagcgaaggggtttgca
caagatcttgccaaggacgtggagactctgggcctgcctgctgaagtccatgacctgaag
ggttatgatccggatgacagtctgccagatgagactacaagcaaagctgtttgtgtgttc
atcctggctacttacacagacggacagcccacagagaatgcagagtggttctgtaagtgg
ctgcaggaagcatcgaatgatttccgatatggcaaatcatacctaaaaggtgtgagatac
gcagtgtttggattgggaaactctgtttacgtcggccactacaacactgtgggtaagaat
gtggacaagtggctgtggatgctgagtggcagccggatcatgacccgtgggcagggagac
tgcaatgtggtgaagagcaagagcggcagcgtggagggagacttcagggcgtggaaatcc
atgttcctgagccgcctgcaggctcttgtgaagggagagaagcaagcttgcagtggggac
tgtaagaagggaaagtgcaagaataagaaacaccagcacagagaggagaaggagcagaac
gccggggcgcaggaggagcacagttcagaggagatttttgagaccagcagcgaggaagac
tccagtcacgaggaagaagcctctcggggatctgtgattgatgttgaagatctgggaaat
gtcatgaaccatatgaagaaaatcaagaaaaaaaacgagaccgaggtcaagctgtcgaag
cagggtcccgtgaaaagcgaggacgcagaggcacgggaaatgatcacaccggctcttcgg
gacgccctcacaaagcaaggttataggctgattggaagtcactctggtgtgaagctctgt
cggtggaccaagtctatgctgagaggtaggggtggctgctacaagcacactttttatggg
attgagtctcaccgctgcatggaaactactcctagcctcgcctgtgccaacaaatgcgtg
ttctgctggagacatcacactaatccagtgggcacagagtggcgctggaagatggaccag
cctgagaagatcctgcaggaggccattgagaaccaccagaacatgatcaagcagttcaga
g
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