Polyodon spathula (Mississippi paddlefish): 121308598
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Entry
121308598 CDS
T07273
Name
(RefSeq) calpain-A-like isoform X1
KO
K08585
calpain, invertebrate [EC:3.4.22.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121308598
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C2: calpain family
121308598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Motif
Other DBs
NCBI-GeneID:
121308598
NCBI-ProteinID:
XP_041097000
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MGSSCSCSHTTVTQIHVVKPEPFAQPCQAAGAGSSKQPHVPVETRPVFELHNEANKKALA
LGLKDKTWDKVRGDIQALVDGRERDREPDLYSQSGARSEGIFKLSEDKVVNSARYQEVLS
ELQPGELWKDPDFPPAPASLTYEEVPPPAIQWLRASQLHPAACFMEDGVSKGDIIQGELG
DCWFWASVATILHSRKLIEKVIPPGQTITERKIYTALFRFRFWQFGSWVEVLVDDFLPTH
NGRLIYARSAAGNEFWPSLLEKAFAKLHGSYRAIEGGWTLDALTDLTGGVGEMYRIRDFT
GHLEQLYSHLATASRKKAFIACGTSRRTESEQSGREDGLVAGHAYSITAVKKLTTPRGRV
PLVRILNPWGCGQSMEWTGDWSDDSPLWDEIPLWTRESFGFTKKEDGEFWMKFDDFCERF
ANVTVLTLGPDFYCDGSTDAGSLLEVKGQWVSGVNAGGCRNNLLMYPSNPQHPITIRETS
EQAFLSVACNLKIQCKGSRAGSPHCVALLLVAGGQEAAEDEGCSVMVCLLQKFIRGKRRP
EPGMNPIGIQVYKSGDPKTPLTAELLVRQREVSDSGPYVAQRSVNLRCQLSAGSYTIIPS
TFNPGTPGDYMLRIFSGSPVQLHQGHHLSACPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggggagtagctgttcctgcagccacacaacggtcacacagattcatgtagtgaagcca
gagccatttgcacagccgtgtcaagcagctggagcaggctcttctaaacagccacacgta
cctgtggagactcgcccagtctttgagcttcacaatgaggctaataagaaggccctggcg
ctggggttaaaggacaaaacgtgggacaaagtcagaggagacattcaggccctcgtggac
ggccgggagagagacagagagccagacctctacagccaatcaggggcgaggagcgaggga
atatttaagctgagcgaagacaaagtggtcaactcagcacgataccaggaggtgctgtca
gagctgcagcctggagagctctggaaggacccagacttcccccctgccccagcatctctg
acctatgaagaggttccaccgccagcaatccagtggcttcgagcttcgcaactgcacccg
gctgcctgtttcatggaggacggggtcagtaagggtgacatcatccagggggagctgggg
gactgttggttttgggcctctgtggccaccatccttcactccaggaagctcatcgagaag
gtcatacccccaggtcagaccatcacggaacggaagatctacacagcgctgttccggttc
cggttctggcagttcgggagctgggtggaggtcctggttgatgacttcctcccgacccac
aatggcaggctgatttacgcccgctcggccgctgggaacgagttctggccttccctgctg
gagaaagccttcgccaagctgcatggctcataccgggcaattgagggcggctggacgctg
gacgcgctcactgacctgaccggaggggtgggggagatgtaccgcatcagggatttcacc
ggccacctagaacagctctacagccacctggccacagcatccaggaagaaagccttcatc
gcctgtgggaccagccggcggacagagtctgagcagagcgggagagaagacggcctggtt
gcaggacatgcctatagcatcacagcggtgaagaagctgaccactccgagggggagggtg
cccctggtccgaattctgaacccctggggctgtggacagagcatggagtggacaggggac
tggagcgatgactcaccgctgtgggatgagatcccgttgtggaccagggagtcttttggg
ttcaccaaaaaagaagatggtgaattctggatgaagtttgatgatttctgcgagagattt
gccaatgtcactgtgctcacccttggaccagatttttactgtgatggcagcacagatgca
ggtagcctcctggaggtgaaaggtcagtgggtgtcaggggtcaatgcagggggctgccgg
aacaacctgctgatgtaccctagcaacccgcagcacccaatcacaatccgagagacgagt
gagcaagccttcctgtctgtggcgtgcaatcttaaaatacagtgcaaggggtcgagggcg
gggtcccctcactgtgtggctctgctgcttgttgcaggaggtcaggaggctgctgaagac
gaggggtgctccgtcatggtctgcctcctccagaaattcatcagggggaaaaggagaccg
gagccaggaatgaaccccatcggaattcaggtttacaagagcggtgaccccaagaccccc
ctcaccgctgagctactggttcgacagagggaggtgtctgactcgggtccctacgtggca
cagcggagtgttaatctacgctgccagctgtccgcaggaagctacaccatcatccccagc
accttcaacccgggaacccctggagattacatgctgcgcatattctcagggtctcctgtg
cagctgcaccagggacaccacctctctgcctgtccgctgtga
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