Polyodon spathula (Mississippi paddlefish): 121308769
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Entry
121308769 CDS
T07273
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121308769 (ddx52)
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121308769 (ddx52)
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
90S particles
Helicases
121308769 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Motif
Other DBs
NCBI-GeneID:
121308769
NCBI-ProteinID:
XP_041097316
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MDAFDLFRRLGAGARFDLKKFGKDAERFKVVKSKKSEWTDSSSSVPDFFSTNGNSSGVRS
RDEHHVGSKPETEGSPPAGKRKRGAEESGKQMRKNQSPDDEADTGDSEAPESDGILWTSS
LDKKAKGPPGKSQKPSWKRLKHLHQEKVNGIRHKHKIYTHGSDLPDPVTSFEQLQEEYKV
HPRIIHNIKEAGFQAPTPIQMQAIPVMLHSREVLACAPTGSGKTVAFCLPILCHLKQPMN
KGFRALVLSPTRELASQTHRELVKLSDGVGFRVHMIHKGAEAAKKFGPKSSKKYDILVTT
PNRLVYLLKQDPPAIDLSNVEWLVVDESDKLFEDGKSGFREQLAAVFMACSSHLVKRAMF
SATFAPDVEQWCKLNLDNLVSVSIGQRNSAVETVEQQLLFVGTENGKLVAMRDLVKKGFL
PPVLVFVQSIERAKELFHELIYEGINVEVIHAERTQQQRDNVVKSFRAGKIWVLICTALL
ARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAITLFTEEDKPLLRSIANVIR
QAGCPVPDYMIGFKKLHSKQKNRLMKRPPRRETIRTTPLYLMKGKGKGNAKRKPKQKKNK
EEKAEKAPSAPAETSAS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcgacttgtttcgtaggctgggagcaggggccaggtttgatttgaagaag
tttggcaaggacgccgagaggtttaaggtggtgaaatccaagaaaagcgagtggacagac
tcctccagcagcgtgccggacttcttcagcacaaacgggaacagcagcggcgtccggagc
agagatgagcaccacgtgggctccaagccggagacggagggatcgcccccagccgggaag
aggaagagaggagcggaggaatctggaaagcaaatgagaaagaatcaatctccagatgat
gaagctgacactggggactctgaagccccggagagcgatggcatcctgtggacatcctcg
ctggataagaaggccaaggggccgccaggaaagagccagaagccgtcctggaagaggctg
aagcacctccaccaggagaaggtcaatggtatcaggcacaagcataagatttacacccac
ggctcagacctgccggacccagtcacctcattcgagcagctgcaggaggagtacaaggtc
cacccgcgcatcatccacaacatcaaggaggccggcttccaggcccccacccccatccag
atgcaggccattcccgtcatgctgcacagtcgggaagtgttggcgtgcgcgcccacaggt
tcggggaagacggtggcgttctgcctccccattctgtgccacctgaagcagcccatgaac
aaaggcttcagagcactggtcctctcccccaccagagaactggccagccagacacacagg
gagctggtcaagctgtccgacggtgttggcttcagggtgcacatgatccacaaaggggcc
gaggcggccaagaaattcggacccaaatcctccaagaagtacgacatcctggtgacgacc
ccgaacaggctggtctacttgctgaagcaggatcctccagcaatcgatctcagcaacgtg
gagtggctggtagtggacgagtcagacaagctcttcgaggatgggaagagcggcttcagg
gagcagctggctgccgtgttcatggcgtgctcctcacatctggtgaagagggccatgttc
agcgccaccttcgcccctgacgtggagcagtggtgcaaactcaacctggacaacctggtc
tccgtctccatcggacagaggaactcggctgtggagactgtagaacagcagctgctgttt
gtgggcactgaaaacgggaagcttgtggcaatgagggatctggttaagaagggttttttg
cctccagtgctggtgttcgtgcagtccatagagagagccaaagagctgttccacgaactc
atctacgaaggcatcaatgtggaagtgatccacgccgagcggacgcagcagcagagagat
aatgtggtgaagagtttccgagccgggaagatttgggtgctgatctgcacagccctcctg
gcccgagggattgactttaaaggggtcaacctggtgatcaactatgacttccccaccagc
tcagtagagtacatccaccggataggccgaactggaagagcagggaacaggggtaaagcc
atcacgttattcacagaagaggataaacccttactaagaagcatcgcaaatgtcatcagg
caggccgggtgcccggtccctgactacatgatcggattcaaaaaactgcacagtaaacag
aagaacaggctgatgaagagaccaccaaggagggagacgatccggaccaccccactgtac
ctgatgaaggggaaggggaaaggaaacgcgaagcgaaaaccaaagcagaaaaaaaacaaa
gaggagaaagcagaaaaggcccccagcgcccccgcagagacgagtgcgagttga
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