Polyodon spathula (Mississippi paddlefish): 121309117
Help
Entry
121309117 CDS
T07273
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121309117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121309117
04147 Exosome [BR:
pspa04147
]
121309117
04090 CD molecules [BR:
pspa04090
]
121309117
Enzymes [BR:
pspa01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121309117
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121309117
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121309117
CD molecules [BR:
pspa04090
]
Proteins
121309117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Rad17
AAA_22
Zeta_toxin
AAA_16
RsgA_GTPase
DUF2207_C
AAA_5
DUF3487
AAA_29
AAA_15
Motif
Other DBs
NCBI-GeneID:
121309117
NCBI-ProteinID:
XP_041097943
LinkDB
All DBs
Position
3:complement(54579411..54603176)
Genome browser
AA seq
764 aa
AA seq
DB search
MKLPNKFETLVGNRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEVIVQMAL
DKVRKGRTTMVVAHRLSTIRNADIIVSFENGVVTDQGTHSELMSRKGVYQTLVTMQAYTG
KDKGLDAAEEVVVDEKSHSLVSLTGSTLFRSSSRLSGKTPEKDLESKVYDETTENDEKVP
RVSFFSVLKLNKTEWPYLALGTFCALVNGGIQPAFAIIFSKIIGVFAETDREVLRYKATM
FSLFFLAIGGVSFFSLFFQGFSFGKSGEILTMRLRFKAFKAMLRQDLAWFDDPKNSTGAL
TTRLATDAAQVQGATGSRLATFAQNAANLGTAVIISFFYGWQLSLLILAIVPVLAIAGVM
QTKMLSGHAEKDKKELEVAGKIATETVENIRTVVSLTRERKFESIYEENLEVPYRNSQKK
AHVYGLTFALSQAMEYFAYAGCFRFGAYLVTKKIMNFEDMFLVISALVFGALAAGQATSF
GPNYAKAIVSASHLFMLLDRVPAIDNDSEEGDQLKQVDGNIKFEGVVFNYPSCPGVQILQ
GLSLKVKKGQTLALVGSSGCGKSTAIQLLERFYDPLKGKVMLDNCNMKELNIQWLRAQMG
IVSQEPVLFDCSIAENIAYGDNSRNVTQEEIVAAAKAANIHSFIEGLPDKYNTQAGDKGT
QLSGGQKQRVAIARALVRNPKILLLDEATSALDTESEKIVQEALDNAREGRTCIVIAHRL
STIQNADKIAVFQNGQVVELGTHEQLLSSQGAYHSLANVQMQHK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacccaataaatttgaaaccttggttggcaacagaggcacacaacttagcgga
ggtcagaaacaaagaatcgcaattgctcgagctctggtccgaaaccccaagattctcctg
ctggatgaagcaacttcagcactggatactgagagcgaagtgattgtgcagatggcactg
gacaaggtgagaaaaggccggaccactatggtagtggcccatcgcctgtctacaattcgc
aatgcagacattatcgttagctttgagaatggagtggtcacagaccaaggcacgcacagc
gagctaatgagcagaaagggggtttaccagacccttgtcactatgcaggcatacacaggg
aaagacaaagggctggatgctgcagaggaggttgtggtagatgagaagagccattccctg
gtatcgttaactggatcgacactgttcagaagttcaagccggctgagtggaaaaacgcca
gagaaggatctggaaagcaaagtttatgatgagacaactgagaatgatgaaaaggtgccg
cgggtatcttttttcagtgtcctcaaactcaacaagacggagtggccctatctggcttta
ggaaccttttgtgcccttgtgaatggaggtatccagcctgcatttgccattatcttttcc
aaaatcataggggtttttgctgaaacagacagagaagtgttgcgatacaaagccacaatg
ttctcattattctttttagcaattggcggggtttcatttttcagcttattctttcagggt
tttagctttggaaaatctggagaaattcttacaatgagacttcgattcaaggcatttaaa
gctatgctgcgacaggaccttgcctggtttgatgaccctaagaacagcactggagccttg
acgacaagacttgcaactgatgcagctcaagtgcaaggggctactggttccaggcttgct
acctttgctcagaacgctgccaaccttgggacagccgtgatcatttcattcttctatggc
tggcagctctctctcctcatcctggcgattgtgccagtgctggccattgcaggggtgatg
caaacaaaaatgctgtcggggcatgctgagaaggataaaaaggaactggaagttgctgga
aaaattgccacagagaccgtggagaacattcgaaccgttgtttcattgaccagagaaaga
aagtttgaatccatctatgaggaaaacttggaggtcccttacagaaattcacagaaaaag
gctcatgtctatggcctgacttttgccttatcccaggcaatggaatactttgcatatgct
ggctgctttcgttttggcgcctacctggtgacaaaaaaaattatgaattttgaagacatg
tttcttgtcatttcagcccttgtgtttggcgctcttgcagcaggacaggctacttctttc
ggtcccaactatgccaaggccatagtatctgcatcccacttgtttatgctgttagacaga
gttccagccatagacaatgactctgaagagggagaccagctgaaacaagttgatggcaac
atcaagtttgaaggtgtcgtgttcaactacccttcctgccccggcgtgcagatattgcag
gggctcagtttaaaggtgaagaagggacagactctggcactggtgggtagcagcggatgt
gggaagagcactgccatacagctgctggaaaggttctatgatccactgaaaggcaaagtg
atgctggacaactgcaatatgaaggagcttaatattcagtggctcagggctcagatgggt
attgtatcccaggagcctgtgctgttcgactgcagcatcgcagagaacattgcctatggt
gataatagcaggaatgtgacccaggaggagattgtggcagcagctaaggcagccaacatt
cactccttcattgaaggactacctgataaatacaacacccaagctggtgacaaagggact
cagctctctggtggacagaagcagcgtgtggcaattgcccgtgcactcgtccgaaatccc
aaaatcctgctcttggatgaagccacatcagcactggacacagaaagcgaaaagattgtg
caagaggccctggacaatgctagagagggccgcacctgtattgttatagcacatcggctg
tccactatccagaatgctgataagatcgcagtgtttcagaacggccaggtggtggagctg
gggacacacgaacaacttctctccagccagggcgcataccattcacttgctaatgtccag
atgcaacacaaatga
DBGET
integrated database retrieval system
