Polyodon spathula (Mississippi paddlefish): 121314427
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Entry
121314427 CDS
T07273
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121314427
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
121314427
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
121314427
NCBI-ProteinID:
XP_041103630
LinkDB
All DBs
Position
4:31691859..31774764
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AA seq
1478 aa
AA seq
DB search
MAQCLHSVQEFIQDSFVPMVAVLCSEDAEQVTRKNNLNFSELVRPFCRLTSEGHVRDPNN
QIQAIKNLKIHVSNVVTQPPRPAAIRKMLSEVVSVSQPAEGLVANVITAGDYDLNISDRS
VKASVPWYNSWKETLTQLNASKSFTATTPWFEAYRETFFQSMPASDHEFLNHYLACMLVV
SSNEPQPVEQFLKLSQEQHRIQHSSDYTYPKWFTPNTLKYYVLLHDISEGDEQRADSVYE
EMKQRYGTQGCYLLKINSRTSAVSSDEQIPDPWSQYLQKSNLQNQELYEDGTSVMMGSKN
TENNISAPEVGGIDPSVKADGVPNNFKTHPLQLNHLSDPDGSLDALDTLRFTVQITDGKK
ASTVTTHGACLTLNDHDRIRQFIQEFTFRGLLPHIEKSIRQLNDQLVSRKGLSRSLFSAT
KKWFSGGKVPEKSIAELKNTAGLLYPPEAPELQIRKLADLCFLVQHYDLAYNCYHTAKKD
FLNDQAMLYAAGALEMAAVSAFLQPGAPRPYPAHYMDTAIQTYRDVCKNMVQAERCALLS
AEILKSQVKYSEAATLLIRMTSEDSDLRSALLLEQAAHCFINMRSPMVRKFAFHMILAGH
RFSKAGQKRHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLKQLDNAVSAFRHILI
NDSKQTASQQEAFLREYLYVYKNISQLSPDDPLPQLPLPCIQSSATRVFFGHDRRLAEGQ
KQAATHVSLDQEFDCELSQQWKELEEQVVAVVNRGAIPANFQPTQYCLNSQTDNLRFPLA
VVQEPIIVEVVFKNPLKVPLLLTDLSLLWKFQSKDFGQLQNGDEPISNEKEAHVKATFKN
EIVSTEVILEFSMSSEETKVARLKLLPHQTGELHILGLVYNLETVPCVDVVYPSSGVQGE
GNVVSNGMSVRGRQDLEIQGPRLNNTKEEKTSVKHGPDRRLDPIITPPMPLLEVFFINFP
TGLLCGEIRKAFVEFVNVSKVPLAGLKVASKHPEFFTFGSSTAALTPQSPTASENCSAYK
TIVTDSTSACTALTSLVSPVEFGMGSGNSSLGVIDIPLPDCVLLPGASIQLPLWLRGPDK
EGVHEIQFLFYYESPNKVSKLSHRVLRHTAVICTSRSLSVRATVCRSNTFPDEEDGRNGN
MLVFVDVENINTNESGVREFHIVQVSSSSKQWRFQKCINPSEDKDAKLTSRERGKLCFKA
TTCKYQEATSGALGKYTFADIILGNEQIISATTPCADFFFRSCHSSESKKTLTNGYTSFV
PAKWPTDDVGKVVRKCSEIDLNIIVLWKAYVVEDNKQLILEGQLHVALQTVGKEAYSLSQ
KQEAQEMVLLKLIRPEQPPLPTRPSVEQLSHLIKTSLHYPESYDHPFLHKSLCVVPVTLM
LSNCSQAGVDVIIDLRHKAISPETLEVHGSFTWLGQTQFKLQLKAQEIHKLQLKACFIHA
GVYNLGNPRVFAKLTDQGSMCETSQQNSMPALIIINNI
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgtctccattctgtgcaggagtttatccaggactcctttgtccctatggtg
gccgtcttgtgcagcgaagatgcagagcaagtgactcgtaaaaacaacctgaatttctct
gagctggtcaggcctttctgccggctcacctcggaaggccatgtgagagatcctaataac
cagatccaagcaatcaaaaatctgaagatacatgtgtccaatgttgtcacccagccacct
cgcccggctgccattcggaaaatgctgagtgaagttgtctctgtcagccagccagcggaa
ggattagttgctaatgtgatcacagcaggagattatgatctcaatatcagtgatcgctca
gttaaagctagtgttccttggtacaatagttggaaagaaacactgacgcaactgaacgca
tccaagtccttcacagcaacaacaccttggtttgaggcctacagagaaaccttcttccag
tctatgccagcttcagaccatgagtttcttaaccactatctggcatgtatgcttgtagtt
tcatctaatgaacctcagcctgtggaacagtttttgaagctgtctcaggagcagcaccgg
attcagcacagcagtgactacacctatccaaagtggtttactccaaacacactgaaatac
tatgtgctgcttcatgacatcagtgaaggagatgaacaaagggcagattctgtttatgaa
gaaatgaaacagagatatggaacgcagggttgttatttacttaaaatcaattcccgaact
tcagcagtatcatcagatgagcagataccagacccttggagccagtatttacagaaaagt
aatttgcaaaaccaggaattgtatgaagatggcacatctgtcatgatgggcagtaaaaat
acagaaaataatataagtgcacctgaagtgggtggaattgatccttcagtcaaagctgat
ggtgttcccaacaacttcaaaacccatcctcttcagctgaatcacctcagtgatccagat
ggcagccttgatgcccttgataccttaaggtttactgtacagataactgatgggaagaaa
gctagcactgtgaccacacatggcgcatgtttgacacttaatgatcatgaccggattaga
cagttcattcaggagtttacattcagggggcttctaccccatatcgaaaagtctatccgt
caacttaatgaccagctggtgtccagaaaaggtctaagtaggtctttattttcagctact
aagaagtggttcagtggtggcaaagtaccagaaaaaagtatagctgaactgaaaaataca
gcaggtctgctatatcctccagaggctcctgaacttcagataaggaaattggcagatttg
tgcttcttagtgcagcattatgatttggcatacaactgttaccatacagccaagaaagac
tttttgaatgaccaagcaatgctttatgctgctggtgctctggaaatggcggcagtatct
gcttttctacagcctggtgctcccagaccctacccagcacattatatggatacagcaata
cagacttacagggatgtgtgcaagaatatggtgcaggcagaaaggtgtgctttattgagt
gctgaaattctgaagagtcaagtaaagtattcagaagctgccactctcttaatccggatg
accagtgaggattcagacctacgaagtgcccttttactggaacaggctgcacattgcttt
ataaatatgagaagtccgatggtgcgcaagtttgcatttcatatgatactggccggacat
aggtttagcaaagctgggcagaaaaggcatgccctgcggtgttactgtcaagcaatgcag
gtatacaaaggaaaaggctggtcccttgccgaagaccatattaactttaccattggacgc
caatcttttacactgaagcaactggacaacgcagtgtcagccttcaggcatatattgatc
aatgacagcaaacaaacagcctcccaacaagaggctttcctgagggaatatctttatgtt
tacaagaacattagccagctgtcgccagatgatcctttaccacagcttccgttgccttgc
atacagagttcagcaacacgggtcttttttggacatgaccgacgactggctgaaggacaa
aaacaagcagctacccatgtcagcttggaccaggaatttgactgtgaattgtcacagcag
tggaaagagctggaggaacaagttgtagctgtagtcaaccgaggagcaatcccagcgaac
ttccagccaactcagtactgtctgaacagccaaactgacaacttaagatttccactggct
gtagtacaagagcccatcatcgtggaggttgtctttaaaaaccccctgaaggttcctctc
ctgctgaccgacctctcgctactatggaagtttcaatccaaagatttcggtcagcttcag
aacggggatgagccaataagcaatgagaaagaggcacatgtgaaggcaaccttcaaaaat
gagattgtcagcacagaagtcatactggagttttctatgagtagtgaagaaacaaaagtg
gcacgtttgaagctccttccccatcagacaggagagttgcacattcttgggcttgtttac
aacttggaaacagtcccatgtgtggatgtggtatatccttcttctggagtacagggggaa
ggaaacgttgtaagtaatggtatgtcagttcgaggtcgtcaggatttggaaattcaagga
cctcgtcttaataacactaaagaagagaaaacttcagtcaagcatggtcctgatcgacgg
ttagaccctatcatcactcccccgatgccactgctagaggtattctttattaattttcct
actggactgctctgcggagagatacggaaagcatttgtcgaatttgtgaatgtaagcaag
gttcctcttgctggattaaaagttgcatccaaacatccagagttctttacatttggaagc
agtactgcagcactgacaccacaaagtcccacagcatcagaaaactgcagtgcatacaaa
actatagtaacagactctacctctgcatgtacggcattgacttctctggtgtctcctgtg
gagtttggaatgggttctgggaactcctctcttggggtgattgatattccgctgcctgac
tgtgtactcttacccggagcctctattcaactgcctctctggctgcgaggacctgataaa
gaaggcgtccatgaaattcaattcctgttttattatgaaagccctaataaggtttccaag
ctgagccatagagttttacgacacacagcagtgatctgcaccagtcggtctctgagtgtg
agggcaacagtttgccggagtaatactttcccagatgaagaagatggtagaaatggcaat
atgctagtttttgtggatgttgaaaacatcaacactaacgaatcaggtgttcgggagttt
cacattgtgcaggtgtctagtagcagtaaacagtggaggttccagaagtgcataaaccca
tctgaagacaaagatgcaaagcttacaagcagagaacgaggaaaactgtgtttcaaagca
actacatgtaaatatcaagaagctacctcaggtgcattagggaagtatacatttgctgac
atcatcttaggaaatgaacagataatcagtgcaaccactccatgtgcagacttttttttc
cgaagctgccactcttctgaatcaaagaagaccctgactaacggttatacaagttttgta
cctgcaaaatggccaaccgatgacgtgggaaaagtcgtacggaaatgcagtgaaattgat
ttgaacatcattgtgctctggaaggcatatgtggttgaagacaacaagcagcttatttta
gaaggtcagcttcatgtagctcttcagacagtagggaaggaagcatattctttatcacaa
aaacaggaagcacaagaaatggtgctgttaaaattaatccgacctgaacaaccacctcta
ccaacaaggccgtcagtggagcagctttctcatcttataaaaacaagtcttcattaccct
gagtcctatgaccacccattcctacacaagagcctttgtgtagtaccagtaacccttatg
ctttcaaactgctctcaagctggagttgatgtgataatagacctgcgacataaagccata
agccctgagacattagaagtccatggttctttcacttggcttggacagacccagttcaaa
cttcagctcaaagctcaggaaattcacaagcttcagctcaaagcctgcttcattcatgca
ggagtctacaatctgggaaacccaagggtctttgctaaactgactgaccaaggttcaatg
tgtgaaaccagccagcaaaactctatgccagcactgatcataatcaataacatctga
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integrated database retrieval system
