Polyodon spathula (Mississippi paddlefish): 121315156
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Entry
121315156 CDS
T07273
Symbol
hsf1
Name
(RefSeq) heat shock factor protein 1 isoform X1
KO
K09414
heat shock transcription factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121315156 (hsf1)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
121315156 (hsf1)
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GFIT
Motif
Pfam:
Vert_HS_TF
HSF_DNA-bind
Jnk-SapK_ap_N
ZapB
ADIP
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
121315156
NCBI-ProteinID:
XP_041105083
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Position
4:complement(94230150..94264315)
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AA seq
547 aa
AA seq
DB search
MEMDLHSGGVGSVSGGILGSGSNVPAFLTKLWTLVEDPDTDPLICWSPSGNSFHVFDQGH
FAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPEKDDTEFQHAYFIRGQEHL
LENIKRKVTNVSNIKHEDIKIRQDDVSKLLTDVQIMRGKQENMDSKLIAMKHENKALWRE
VASLRQKHAQQQKVVNKLIQFLISLVQSNRVLGMKRKLPLMLNDSSTAHSMPKYSRQYSL
EPLQGSPAFSPTSQSYTGANLFSSDSTVNSGPIISDVTDLPQLSPSASPNDQTEEDSTSP
SVLIKEEPPSPEEVQSIVLNEAPLDIVVNEAPLSPNTFIDSLLEDSEAGGASAGSSTAQS
QDGEKCLSLACVENLSQSPQMSEVTCVFTNPSSSCLHSRPEQGNDLSEHLETIDSNLENL
QTILTGQSISFDSSPLFDLFASSLSSTDFNLPDLDTSLASIQDLLAQDQKSTGTAPNSAD
TGKQLVQYTAQPLLLLDPSNADEGSSDLPNLFELDDDNSYFGPGDDTEDPTISLLSNTTY
QSKTRDP
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatttgcatagcggcggcgtaggatctgtttctggagggattttgggcagt
ggtagcaatgtccctgccttcctaacaaagctttggactttggtggaagatccagacact
gatccactgatctgttggagtccgagtggtaacagcttccatgtgttcgatcagggccac
tttgcaaaggaggtgcttcccaaatacttcaagcataacaacatggccagctttgtgcgg
cagctaaatatgtatgggtttcgcaaggttgtccacattgagcagggtggcttagtgaag
ccagaaaaagatgatacagaattccagcatgcgtatttcatccgaggtcaggagcacctt
ctggagaatattaagaggaaggtgaccaatgtttccaatataaaacatgaagacatcaag
attcgccaggatgatgtgagtaaattattgactgatgtccagatcatgagagggaagcag
gaaaacatggactccaaactcatcgccatgaaacatgagaataaggctttgtggagagag
gtggccagcctgagacagaagcatgctcagcagcagaaagtcgtcaataagcttattcag
ttccttatctcactggtccagtccaacagggttttggggatgaaaaggaaacttcctttg
atgttgaatgacagcagcactgcacattccatgccgaagtacagtcggcagtattctctg
gaacccctgcaaggctcgcctgcgttctcacctacatcccagtcctacacaggagcaaac
ctgttctcctctgattcgacggttaactctggtcctataatctcagatgtcacagatctc
ccacagcttagtccctctgcttccccgaatgaccagacagaggaagacagcacgagcccc
tcagtcctcataaaggaggagccaccgagccctgaagaagtgcagagcatcgttttgaac
gaggctcctctcgacattgttgtgaacgaggcgcctctctctcctaacacctttattgac
tctctactcgaggacagtgaggccggtggagccagtgctggctccagcacagctcagtcc
caggacggggagaagtgtctaagtctggcctgtgtggaaaatttgagtcagtctccgcag
atgtcagaggtcacttgtgttttcaccaatccttcctcttcctgtcttcattccagacca
gagcaagggaatgacctttctgaacatttagaaaccattgattccaatttggaaaacctg
cagacaatcttgacggggcagtccatcagctttgattcctctcctctctttgatctcttt
gcctcatccctctcatctactgattttaacctgccagatctggacaccagccttgcaagt
atccaggatttgctagcacaggatcagaagtccacaggcacagctccaaactccgcggac
actgggaaacagctggttcagtatacagcccagcccttgctactgctggaccccagcaat
gccgatgagggaagctcagacctgcctaatctgtttgagttggacgatgacaactcttac
ttcggccctggagacgacactgaggatcccacgatctctctactttcaaacaccacctac
cagtcgaaaaccagggacccttag
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