Polyodon spathula (Mississippi paddlefish): 121317272
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Entry
121317272 CDS
T07273
Name
(RefSeq) proto-oncogene c-Rel-like isoform X1
KO
K09254
c-Rel proto-oncogene protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121317272
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
121317272
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Sof1
Motif
Other DBs
NCBI-GeneID:
121317272
NCBI-ProteinID:
XP_041108954
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Position
6:complement(48339536..48355166)
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AA seq
606 aa
AA seq
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MSVPATHVLMSRASQHLGGEPSVQMFEEPKQRGMRFRYKCEGRSAGSIPGERSTDNNRSF
PSIQILNYYGKGKVIVSLVTKSVPYRPHPHDLVGKDCKDGYYEAEFGPERRVISFQNLGI
QCVRRREVKESIVFRIAKCINPFNVPREQLLKTEEYDLNVVRLCFQIYLQDESGHYTRAL
PPIVSNPIYDNRAPNTAELRICRVNKNYGDVKGGEEIFLLCDKVQKDDIEVRFFTQSWEG
KGLFSQADVHRQVAIVFKTPPFHTNITAPVTVQMQLRRPSDQEVSEPVDFRYLPDNTDPY
HFQEKKRKIEEFQKRMQALPGIHQMERHKIVPKNIKKEPFNMFPQRPVVSVANSTLPQSV
SFVQQTQNNMTNSMFTHNDLQQSSLMTNPPQSTSASSSWSPVVTSGISLDTIRLSQPSTS
SSMLSSVQTSKTLPPLADNPGLPLLTDHYLRFLDLQSNPSQPSVNQKDTNTNNTGALSVQ
HQSTFNVAGPDIFGGRNSVMNLMVSSTENNMETDDILLSGIPGSMFHWKQEEQGAQAGGT
SPLGMNFSSTAQGLLNNGGGVFQGCVQPCSDVSNSLNCGAHNEQFEGGANQGEDRFDAIL
QEWFFQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttccagcaactcatgttcttatgtcaagggcttcccaacatttagggggggag
cccagtgttcagatgtttgaggagcctaagcaaagaggcatgcgattcaggtataaatgt
gaaggtcgatcagcaggcagcattcctggagagcgcagcacagacaacaacagatcattt
ccaagtatacagatcctgaattactatggaaaaggcaaggtcatagtttcactagtgaca
aaaagtgttccctatagacctcacccgcatgacttggttgggaaagattgcaaagatggg
tactatgaagcagagtttggcccagaacgaagagtgatctcctttcagaatcttggcatt
cagtgtgtacgtaggagagaagttaaagaatctattgtgtttcggattgcaaaatgcatc
aatccatttaatgttccaagggagcagttgttgaaaacagaagaatatgatctgaatgtg
gtgagactctgtttccagatctacctgcaagatgaaagtggacattacaccagggcttta
ccacccattgtatccaaccccatctatgacaacagagcccccaacacagcagagctgagg
atttgtcgtgtcaacaagaactatggggatgtgaagggaggagaggagattttcctgctt
tgtgataaagttcagaaagatgatatcgaagtccgtttcttcacgcaaagctgggagggc
aaaggattgttttcacaagcagatgttcaccggcaggttgcgattgtattcaaaactccc
ccgtttcacactaacatcaccgccccagtgaccgttcagatgcagctccgcaggccttcg
gaccaggaggtcagcgagccagtagacttcagatatctcccagacaatacagacccatat
cactttcaagagaagaaaaggaagatcgaagagttccaaaaaagaatgcaagctttacct
ggcatacaccaaatggaaaggcacaaaatagtaccaaagaatattaaaaaagagcctttt
aatatgtttccccagagaccagtagtgtccgtggccaatagtactttgccacaatctgtc
agtttcgttcaacagactcagaacaacatgactaattcaatgtttacacacaatgatctg
caacaatccagtctgatgaccaacccaccacaatccacctctgccagtagcagctggtct
cctgtcgtcacatcaggaatctccttggacaccatcaggctcagccagcccagcaccagc
agcagcatgctgtcatcagttcagaccagcaagaccttgcctcctttagcggacaaccct
ggactccctctactgacagatcattacctgagatttttggatttgcaaagtaatccatca
cagccttccgtaaaccagaaggacacaaacactaacaataccggagccttgtctgtccaa
catcagagtacatttaatgtcgctggtcctgacatctttggtgggagaaatagtgttatg
aatctaatggtttccagcacagaaaacaatatggagactgacgatattcttttaagcggc
atcccaggttccatgtttcattggaagcaagaagagcaaggtgcacaggcaggcggtacc
agccctctggggatgaatttcagtagtactgctcaagggctgctaaacaatggaggagga
gtttttcaaggctgtgtacaaccgtgcagtgatgtaagcaacagtttaaactgtggcgca
cacaatgaacagtttgagggaggggctaatcaaggggaagaccgttttgatgctattttg
caagaatggttttttcagtaa
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