Polyodon spathula (Mississippi paddlefish): 121318767
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Entry
121318767 CDS
T07273
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121318767
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
121318767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Bromodomain
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
121318767
NCBI-ProteinID:
XP_041111734
LinkDB
All DBs
Position
7:complement(52461543..52488251)
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AA seq
1749 aa
AA seq
DB search
MAGIHCSQIEAELYYLIARFLQSGPCKKSAQVFVEELEEYELIPKRLDWESREHKRNFDD
WMKINKHIPADYLLRICQRIGPLLDKELPPSVPRVQSLLGLGRQSLLHTAKGCRHPVWSG
PAFAALHRGRPPEPPLIYDKPPNVVTITAARQTTGFASFSHIVSSSTYQHVKMHRRILGH
LSSVYCVAFDRTGKRIFTGSDDCLVKIWATDDGRLLSTLRGHAAEISDLAVNYENTMIAS
ASCDKIIRVWCLRTCAPLAVLQGHTASITSVQFSPAAKGTTRYLTSTGADGMVCFWQWQS
HSMKFNERPFKFTERSRPGVQISCSSFSCGGMFLATGSTDHVIRVYYLGSESPEKVAELE
AHMDKVVAVQFSNNSDSLRFVSGSRDGTARIWHYQQQEWKSTALDMTAKLPGRSVVPGED
KVTKLNVTMVTWDRADSTVITAVNNYLLKVWNPSTGQLLHILSGHDDEVFVLEAHPYDSR
IMLSAGHDGNIFIWDLSKGTKIRNYFNMIEGQGHGAVFDCKFSSDGQHFVCTDSHGHLLI
FGFGCSRPYEKIPDQMFFHTDFRPLIRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPHPT
HYQRLVPGRENCNEEQLIPQLGYLANGDGEVVEQVIGQQTAAELEESLLDGLIRQLQQEH
SQREEPAEQDQGEELGDSRPGEPRSPALMGSPPNVGLRRSGQIEGVRQMHNNAPRSQMAT
ERDLMAWSRRVVVNEMQPGVSRVMEECRVAKGEAECTLYALERRKKPSHSVQGQLSSLRS
LRRTQRKRQHTYQTRSAIDHPPLDRARNSQSDEESQSSREQDDEVLDAGNVSSEEGEPEW
QSESSSSDSSSEYSDWTADAGINLQPPKRQTRQAVRRVRSSSEEEEDHGKERKRPEKRKK
PKQTKRKKPNESLTMAGYTGDEWLPPQWIMDTIPRRSPFVPQMGDEVIYFRQGHEAYVRA
VRRSKSYSINPQKQPWNKMDLRDQESVKVVGIKYEVGPPTLCCLKLAFLDPVSGKMTGES
FSLKYHDMPDVIDFLVLQQFYNEAKEQNWQCGTKFRSIIDDAWWFGTVESQQPFQQEYPD
SLFQCYTVQWDNGEREKMSPWDMDPIPDEVPLPGAVGDGVPVTEEELKALLYSPQEGEWG
ARTRDEECERVLRGIDDLLTLDIAKAFSSPVDLHDYPLYCTVVAYPTDLGTIRKRLENQF
YRRISALMWEVRYIEHNSRTFNEPESPIVASAKIVTDVLLRFIGDQSCMDILDLYTKVKI
ELSSADEEEVEADVDVDSDTPGTSTGRKSAMKHSKRQSSRLDVGAWKEQCRELLNRIFER
EDSEPFRQPVDLFAYPDYRDIIDTPVDLSVVSETLAAGNYENPMEFSKDMRLIFSNSKAY
TPNKKSRIYSMTLSLSASFEKQILPIISDYKSAVQGLRRSRQRMTYRKRLKSGSSSPSTS
QASSPKGKHRQSRTQPKSAPNTSLSLTRTSSTRSSQASETMEDPSCSVMDEDSQPSLMSS
ITTSTSGGAGGERVTRSRATPNKRVISVPSANGPLTNGGNRPLCASAKRKLAVDSDTSDI
EKPEGAESSLSTSSLSSSSSSSSSSSSSGSSSSGSSSSSEGSESDQEFIDGGDHDYSKVV
CPRLTRKTKKATRPVSTNLKKKKREAVPGRQARRRKRPRLMEDEEEQEGEEEEEEQELGK
VRGTRKSAVKESRINTRNQGRRTVLYNDDSEDDPSVPVEDPLNLGMSRCGRVRKMTEKAR
VSHLMGWNH
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatccactgttcacagatcgaggctgaactgtattacctcattgcaagattt
ttacagtccggaccttgcaaaaaatcggcccaggtctttgtggaagagctggaagaatac
gagctcataccgaaacgcttggattgggaatcgagagaacataaacgaaacttcgatgac
tggatgaaaatcaataagcacatcccagctgattacctgctccgaatctgccagcgaatc
ggacccctcctggacaaagagcttcctcccagtgtccccagagttcagagtttactgggg
ctcgggcgacagtccttgctgcacacagcaaagggttgtaggcacccagtatggagcggc
cctgcatttgcagctctgcacagaggcagacctccagaacctcctctaatctatgacaaa
ccaccaaatgttgtgaccatcacagcagcccggcagacaactggcttcgccagcttcagc
cacattgtgtcctcctccacctatcagcatgtgaagatgcaccggaggattctgggacac
ctgtcttcagtgtactgtgtggccttcgaccgaactggcaaaagaatcttcacgggttcg
gatgattgcctggtcaagatctgggctacagatgacggacgtctcctgtcgaccctccga
ggtcacgctgctgagatttcggacttggccgttaactacgagaacacgatgatcgcttct
gccagctgtgacaaaatcatccgcgtgtggtgcctgcggacgtgcgcgcctctggcggtg
ctgcagggccacacggcgtccatcacctccgttcagttctctccggcagcaaaaggaaca
actcgatacctcacatccactggggctgacggcatggtctgcttctggcagtggcagtcc
cacagcatgaaattcaatgagcgtccgtttaaattcacagagagatccagacctggagtc
caaatctcctgttcttccttcagttgtgggggaatgttcctggcgacgggcagcacggat
catgtaatcagggtctactacctgggttcagagtctcctgagaaagtggctgagcttgag
gcacacatggacaaagttgtggctgtgcagttttctaacaacagcgacagcctgcggttc
gtcagtggtagtagagatggcaccgcacgcatttggcactatcagcagcaggagtggaag
agcacagcccttgatatgactgcaaaactgcctgggcgcagtgtggtgccaggggaggac
aaggtgacaaagctgaatgtgacaatggtgacctgggaccgagctgacagcacagtcatc
acagctgtcaacaactacctgctcaaagtgtggaacccgtccaccgggcagctactgcac
attctctcggggcatgacgacgaggtatttgtgttggaagcccacccctatgactctagg
atcatgctgtctgcagggcatgatgggaacatttttatctgggacctgtccaagggcacg
aagattcgcaactacttcaacatgattgaaggtcagggtcacggcgctgtgttcgactgt
aagttctcctctgacgggcagcactttgtttgtaccgactcccacggtcacctgctcata
ttcgggtttggctgcagcaggccctacgagaagattcccgatcagatgtttttccacacg
gatttccggcccctgatccgagactccaataactacgtgctggacgagcagacccagcag
gcaccacacctgatgcccccacccttcctagtggacgttgatggaaacccccacccgact
cactatcagcgcctagttcctgggagggagaactgcaacgaagagcagctcatcccacag
cttggttacctggccaacggtgacggtgaggtggtggagcaggtgattggtcagcagaca
gccgcagagctggaggagagccttctggatgggctgattcgacagctacagcaggagcac
agtcagagggaggagcctgccgagcaggaccagggagaggagcttggagacagccgcccc
ggggagcctagaagcccggctttgatgggctctcctcctaatgtgggtctgaggcgcagc
gggcagatcgagggggtccggcagatgcacaacaatgccccccgcagtcagatggcaacc
gagcgggacctgatggcctggagtcgcagggtagtggtgaacgagatgcagccgggggtc
agcagggtgatggaggagtgtcgggtagcaaagggagaggctgagtgcactctctatgct
ttggagaggcggaagaaaccatcccactcagtgcaggggcagcttagcagcttgcgctcc
ctgagacggacacagcgcaagcggcagcacacttaccagacccgctccgccatagaccac
cccccactggacagggcgcggaattcccagtcggatgaggaatctcaaagctcacgagag
caggatgacgaagttttggacgccggtaatgtctcttcagaggagggcgagccagagtgg
cagagcgagagcagctccagcgactcctccagcgaatactctgactggacggcggacgca
gggatcaacctgcagcccccgaagaggcagacaaggcaggccgtgaggagggtccgcagc
agctcggaggaggaggaggaccacgggaaagagaggaagaggccggagaagcgcaagaaa
cccaaacagaccaaacggaagaagcctaatgagtcgttgacaatggctggatacactggc
gatgaatggctgcccccgcaatggatcatggacaccattccacgcaggtctccctttgtg
ccacagatgggagatgaggtgatctatttccggcagggtcacgaagcctacgtgagagca
gtgcgcaggtccaaatcctacagcatcaacccccagaaacagccgtggaacaaaatggat
ctccgggaccaagaatctgtgaaggttgttgggatcaaatacgaagtgggaccgcctaca
ctgtgctgcttgaagttggcgtttcttgatccagtctctggaaagatgacgggggagtcc
ttctctttaaagtatcacgacatgcccgatgttattgacttcttagttctgcagcagttt
tacaatgaggccaaggaacaaaactggcagtgtgggacaaagttccgcagtattatcgat
gatgcctggtggttcggaacagtggagagccagcagcccttccagcaggagtatccagac
agcctcttccaatgctacactgtccagtgggataacggcgagcgggagaaaatgagtccc
tgggacatggatcccattccagatgaagtgccactgccaggtgcagtgggggacggggtg
ccagtcacggaggaggagctgaaggccctgctctacagccctcaggagggggagtggggg
gctcgcacccgcgacgaggagtgtgagagggtcctccggggcatcgatgatctcctcacc
ctcgacatcgccaaggccttctcttccccggtggacctgcatgattacccgctgtactgc
actgtggttgcctaccccacagacctcggcacgatcaggaagagactggagaatcagttt
tacaggcggatctctgctctgatgtgggaggtgaggtacattgaacacaacagcaggacc
ttcaacgagcccgagagccccattgtcgcctcagccaagattgtcactgatgtgttgctt
cgattcataggggaccaaagctgcatggacatcctggatctgtatactaaagtgaagatt
gagctgagcagtgcagacgaggaggaggtggaggccgatgtggatgtagactctgacact
ccagggacctctactggacgtaagtctgcgatgaagcactcaaagaggcagagctcccgg
cttgacgtgggtgcctggaaggagcagtgccgagagctgctgaaccgaatatttgagcgg
gaggactctgaacctttcagacagcctgttgacctctttgcctatccggattaccgggat
attatcgacacaccggtggatctaagtgtggtctcggagacgctggccgcagggaactat
gagaaccccatggagttcagcaaggacatgaggctgatcttcagcaactccaaggcctac
actcccaacaagaaatccaggatctacagcatgactctcagtctgtctgcctcctttgag
aagcagatcctgcccatcatctctgactacaagtccgcagtgcaggggctgaggcgcagc
cggcagaggatgacctaccgcaagagactgaagagtggcagcagctccccctccaccagc
caagcctccagtccgaaaggaaagcacaggcaatccaggacccagcctaaatcagcccca
aatacctcattgtctctaaccaggaccagttccacaaggtcttctcaagcttcagaaacg
atggaggaccccagctgctctgtgatggatgaagatagccagccttccttaatgagctcc
atcactaccagcacaagtggaggagccgggggcgagcgggtgacaagaagccgcgccacc
cctaacaagcgagttatttcagttccctctgccaatggaccattgaccaatgggggaaac
cggcccctttgtgcctctgccaagagaaagctggcagtggactctgacacttcggacatc
gagaagccagagggagcagaatccagcttgtccacttcttcattgtcgtcatcgtcctcc
tcttcctcttcctcctcttcctcaggcagctcgagttctgggagtagcagcagcagtgag
ggctcagagtcagaccaggagttcatcgacggaggagatcatgactacagcaaggtcgtc
tgcccccgcctcacccgcaaaaccaagaaggcaaccaggcccgtctccacaaacctaaag
aaaaagaaaagggaggcggtgccgggcaggcaggcgaggcgaaggaaaaggccccggtta
atggaggatgaagaggagcaggaaggagaggaggaggaggaggagcaggaactgggaaag
gtgaggggaacccgcaagtcagctgtcaaagagtccaggattaatacccgcaaccagggc
aggagaaccgtattgtacaatgacgattcggaggacgacccctctgtgccagtggaggac
cctctcaacttgggcatgtcccgctgtggtagggtgcgcaagatgaccgagaaggctcgg
gttagccatctcatgggctggaatcactaa
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integrated database retrieval system
