Polyodon spathula (Mississippi paddlefish): 121321777
Help
Entry
121321777 CDS
T07273
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121321777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121321777
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121321777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
121321777
NCBI-ProteinID:
XP_041116885
LinkDB
All DBs
Position
10:8232068..8256624
Genome browser
AA seq
1228 aa
AA seq
DB search
MNVNQQAHMASPYRQPQPALQGYSQPGYGEPPTQYAPYNGPNPGYQQGPAPAGYFPYSSL
PSKALPATLASDLSSNSSSPLDLGPVRPSPNSGPPPMLTPQGYSQYTQGDVQNGPPTMSG
QPHRPPVSQPYLPGSQPAYHQHYGAPHTGMQQMTNQMSGMHVSAPPPAVSGYAPSSHPQT
SVSFSGVPSFSVSSQQNSPAASLTHGQPPSQPPFPGSPPLSQSPFPGVPPPGSQAQYSST
PPLPVSQPQYSSTPPLPVSQPQYASTPPLPVSQLQYSSAPPASSQAHYPGAQPPPASQAQ
FSGSSQTSPFHAPSSSFAPPAGAPRHPGVQPMQALPHSQYLSGPPRQPMQGPPLSQQNHV
APGPPQPGMAPGMQGPSAQPAPPGQGQGVHPHQNGAFGQMSGPQPGYGGSYPGPQNYGAQ
PPPPAAPPQKRLDPDSIPSPQVSELPAVQKTRHRIDPDAIPSPIQVIEDDQANRSSEPFT
TGVRGQAPPLVTTNFQVKDQGNASPSYIRCTSYNFPCTSDMAKQSQVPLAAVIKPLATLP
LDEVPPYIVDHGETGPIRCNRCKAYMCPFMQFIEGGRRFQCGFCSCVTEVPPHYFQHLDH
TGKRVDCYDRPELSMGTCEFTATVDYCKNNKIPQPPAFIFLIDVSYNAVKSGLVDLICAE
LKTLLDYLPRESSEADSCIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDG
FLVNVNESRAVINSLLDQIPEMFADTRETETVFAPVIQAGLEALKAADCAGKLFIFHSSL
PIAEAPGKLKNREDKKLVGTDKEKTLFQPQTSFFGNLAKECVAQGCCVDLFLFPNQYVDV
ATLGVVPSQTGGSVYKYTCFQVPSDGDRFLNDLRRDVQKQVGFDAVMRVRTSTGIRATDF
FGAFYMSNTTDVELAGLDCDKAVTVEFRHDDKLSEESGALMQCAVLYTSCSGQRRLRVHN
LSVNCCTQLADLYRNCDTDTLINFFAKYAYRSILNSPTKTVRDALINQSAQILSCYRKNC
ASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGADISLDDRAYLRQLVTSMDVAESHVF
FYPRLLPLQKLDVEGDTLPTAVRDSEERLSKGGLYLLENGLHLFLWVGANVQQELLQSVF
NTPSFGQIDPSMTNLPELDNPYSRRLRAIIENFRAQRPRYMKLMVVKQDDKLEPIFKHFL
VEDKSTSGGASYVDFLCHMHKEIRQLLS
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcaagcacacatggcctcaccgtacaggcagccacagcctgccctt
caggggtacagccagcccggctatggggaaccccccacacaatacgcaccctacaacggt
cccaatccagggtaccagcagggaccagctccagcaggttattttccttattcaagcttg
ccctctaaggcgcttcctgctactcttgcttctgacctctcctctaactcctcctctccg
ctcgatctaggtccagtgcgaccctcgcctaactctgggcccccccctatgttgaccccc
caggggtacagccagtacacacagggagatgtgcaaaacggccccccgaccatgagcggc
cagcctcacaggcccccagtctctcagccctacctcccaggtagtcagccagcctaccac
cagcattacggagccccgcacactggtatgcaacagatgaccaatcagatgtcggggatg
cacgtctcagctccgccccctgcagtctctggctatgcaccctcttctcatcctcagacc
tctgtcagtttctcgggtgtgccctccttttccgtctcctcacagcaaaactccccagca
gccagcctaacacatggccagcctccctcacagccccccttccctgggtcaccacctctc
tcacagtcccccttcccaggcgttccacctccaggctcccaggcccaatattcgtcaacc
cctcctcttcctgtgtcccaaccccaatattcatcaactcctcctcttcctgtgtcccag
ccccaatatgcatcaacccctcctcttcctgtctcccagctccagtattcttcagcccct
cctgcctcctcacaggcccattacccaggggcccaacctccacctgcctcccaggctcag
ttctctgggtcctcccagacctcccccttccacgcaccctcttccagctttgctccccct
gcaggtgctcccagacaccccggagtgcagccaatgcaggccctgcctcactcccagtac
ctctctgggccccctcgccagcccatgcaagggcccccgctctcccagcagaaccatgtg
gccccggggcccccacagccaggcatggccccagggatgcagggcccctcagctcagccg
gcacccccaggacaggggcagggcgtccaccctcaccagaacggtgcatttggacaaatg
agtgggccacagcctggctatggtggttcttacccaggcccccaaaactatggggcacag
ccccctcctcccgccgcgcccccgcagaaacggctcgacccagactccattcctagcccg
caagtcagtgagctgcctgctgtgcagaaaacaagacatagaatagatccagacgcgatc
cccagcccaatccaggtgatcgaggatgaccaggcgaaccgaagcagtgagccgttcacg
acaggggtcagaggtcaggcaccaccgctcgtcacaaccaacttccaggtcaaagatcaa
ggaaacgcgagcccgagctatataagatgcacatcctacaatttcccctgcacctcggac
atggcgaagcagtctcaggttcctctggctgcagtcatcaagcccttggcgactctgccc
ctagacgaggttcccccgtacattgtagatcacggagagacggggccaatccgctgtaac
cggtgtaaagcctacatgtgtcccttcatgcagttcatcgaggggggccggcgctttcag
tgtggcttctgcagctgtgtgaccgaggtgcctccccattactttcagcacctggaccac
acaggaaagcgagtggactgctatgaccggccggagctctccatggggacatgcgagttc
accgcaactgtggactactgtaagaacaacaagatcccacaacccccagcgttcatcttc
ctgatcgacgtctcgtacaacgcggtgaagagcgggctggtcgacctcatctgtgcggag
ctaaagactctgctggattacctgcccagggagagcagcgaggcggactcgtgtatccgg
gtgggcttcgtcacctataacaaggtgctgcacttctacaacgtcaagagctcgctggcg
cagccccagatgatggtggtctcagacgtagcagacatgtttgtccccctgctggacggg
tttctggtcaacgtgaacgagtcgcgtgccgtcatcaacagtttgctggatcagatccca
gagatgtttgctgacacaagggagacagagacggtgtttgccccagtgatccaggctggc
ttggaggccctgaaggctgcggactgcgcaggtaagctctttattttccactcgtcgctc
cccatcgcagaggctccggggaaactaaagaaccgggaggacaagaaactggtcggcaca
gacaaggagaagaccctgttccagccccagaccagtttctttggcaacctggcgaaggag
tgtgtggcacagggctgctgcgtggacctcttcctctttcccaaccagtatgtggatgtg
gcgacactgggcgtggtgccctctcagactgggggctctgtgtacaagtacacctgcttc
caggtgccttcagatggggatcgcttcctcaatgacctgcgcagggatgtacagaaacag
gtcgggtttgacgcagtgatgagggtccgaaccagtacagggatccgtgcgacagacttt
tttggagctttctacatgagcaacacgacagacgtggagctggctgggctggactgtgac
aaggccgtgacggtggagttcagacacgatgacaagctgagtgaggagagtggtgcactc
atgcagtgcgcagttctgtacaccagctgcagtggtcagaggaggctgagggttcacaac
ctctctgtcaactgctgcacccagctggccgacctataccggaactgtgataccgacaca
ctcatcaacttcttcgccaagtacgcctaccgcagcattctcaactcccccaccaagacg
gtgagagacgccctcatcaaccagagcgctcagatcctgtcctgctaccgcaagaactgc
gccagcccctcctccgccggacagctcatcctgcccgagtgcatgaaattgctcccagtc
tacctgaactgcgtgctgaagagcgatgtgctgcagcccggcgctgacatctccctcgat
gacagagcctacctgcgccagctcgtcacctccatggacgtggcagagagccacgttttc
ttctacccgcgcctgctgccgctgcagaagctggatgttgagggcgacactctacccacg
gctgtgcgggactctgaggagcggctctcgaaaggggggctgtacctccttgagaatggg
ttgcacctcttcctgtgggtgggggccaatgtgcagcaagagctgctccagagcgtcttc
aacaccccctccttcgggcagatcgaccccagcatgacaaacctgccggagctggataac
ccgtactcgcggagactgcgggccatcatcgagaacttccgggctcagagaccgcgatac
atgaagctgatggtggtgaaacaggatgacaagctggagccgatcttcaagcacttcctg
gtggaggacaagagcacaagcggaggggcttcctacgttgacttcctgtgtcacatgcac
aaggagatccggcagctgctgagctag
DBGET
integrated database retrieval system
