Polyodon spathula (Mississippi paddlefish): 121321856
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Entry
121321856 CDS
T07273
Name
(RefSeq) polycomb group RING finger protein 5-B-like isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121321856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121321856
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
121321856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-RING_10
zf-RING_5
zf-Nse
zf-rbx1
zf-RING_6
zf-C3HC4_3
E3_UbLigase_R4
TRAF3_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121321856
NCBI-ProteinID:
XP_041117083
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All DBs
Position
10:complement(13519418..13548315)
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AA seq
253 aa
AA seq
DB search
MATQRKHLVRDFNHYITCYVCKGYLIKPTTVTECLHTFCKRCIVQHFEDSNDCPKCGIQV
HETNPLEMLRLDNTLEEIIFKLVPGLREKEQQQEIEFWRKTKSRENGGDDTPRAKRARMD
DEDEEDGDHDHHRSDPQIAICLDCLRNSSQSAENIVKSEFLPNLEKTILFQFPLQGLMKK
FIRCSSRVTVGTIKKFLSLKLKLPTSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGESSY
PMVLQYRPRIDFG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggctactcagaggaagcacctggtcagagattttaaccactacatcacctgctatgtt
tgtaaaggatacttaatcaagcccaccacagtgactgagtgcctccacactttttgcaaa
cgctgcatcgtccaacactttgaagacagcaatgactgtcccaaatgtggcatccaagtt
catgaaacaaatccgttagaaatgctaaggctggacaacaccttggaagagatcatattt
aaacttgtgcctggactcagagaaaaggagcaacaacaggaaatagaattctggaggaag
accaaatcaagagaaaatggaggagatgacactccaagagcaaagagagcccgaatggac
gatgaagatgaggaagatggagaccacgatcaccacagaagtgacccccagatagctatc
tgccttgactgcttaagaaacagcagtcagtcggcagaaaacatagtgaagtctgagttt
ctacccaaccttgagaaaacgatcttgtttcaattcccgctccagggtttaatgaagaaa
tttatacgctgctcctctcgagtgacggttggaacaataaagaagtttcttagtctgaag
ttaaagcttccaacttcttatgagctggatgtactatgcaacggtgagatcatggggaaa
gatcatactatggaatttatctatatgacaagatggagacttcggggtgaaagttcttac
ccaatggtactacagtatcgaccgcggattgactttggttag
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