Polyodon spathula (Mississippi paddlefish): 121323518
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Entry
121323518 CDS
T07273
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00280
Valine, leucine and isoleucine degradation
pspa01100
Metabolic pathways
Module
pspa_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
121323518
Enzymes [BR:
pspa01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
121323518
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
RimK
ATP-grasp_3
GARS_A
ATP-grasp_4
MCC_alpha_BT
Motif
Other DBs
NCBI-GeneID:
121323518
NCBI-ProteinID:
XP_041120552
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All DBs
Position
11:complement(36852790..36864541)
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AA seq
717 aa
AA seq
DB search
MFTDSVNMAAFLLKVQSWQRVRAVLQQKWLWTNGPVRCSSQGRIEKVLIANRGEIACRVM
RTAKKMGVRSVAVYSDADRHSMHVAMADEAYHIGPASSQQSYLSMEKIMRVAKASSAQAI
HPGYGFLSENTEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKHIMAAAGVPIIEGYHGDD
QSDRKLKEEAGRIGFPVMIKAVRGGGGKGMRIAGSEAEFHDKLESARREARKSFNDEVML
VEKFVENPRHVEVQVFGDQHGNAVYLFERDCSVQRRHQKIIEEAPGPGISPEVRQKLGEA
AVRAAKAVNYVGAGTVEFIMDCQHNFYFMEMNTRLQVEHPVSEMITGTDLVEWQLRVAAG
EKLPLMQEEVELKGHSFEARIYAEDPSNDFLPGAGPLLHLSTPRGDDFIRIETGVRQGDE
VSVHYDPMIAKLVVWGEDRSAALKKLRYCLRQYNIVGLSTNIDFLLSLSRHPEFEAGNVH
TSFIPQHYTELFPAPKTTSKEALCQAALGLILREKTMTSNFITHSDDRYSPFALSNGRRV
NILYTRNLTLLDGENKIEVAVCYSQDGTYRMEIDGEVFQVSGDLIHEDQASYLRCSINGV
ASKPKLVILDNAVHLFSMEGHAEVALPVPKFLAGVSTTAAQGGTVAPMTGTIEKVFVKAG
DKVQIGDPLMIMLAMKMEHTIRAPKAGVIKRVFFKEGSQANRHSPLVELEEEQASSE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgacagcgttaacatggctgctttcctactgaaggttcagagctggcagcga
gtaagggcagtgctgcaacagaaatggctatggaccaacgggccagtgagatgttcatct
caagggcggatcgagaaagtccttattgcaaaccgaggggagattgcatgccgtgtgatg
cgaacggctaagaaaatgggtgttcgttcagtggccgtctacagtgatgcagacaggcac
tccatgcacgtcgcaatggcagatgaagcttatcacattggacctgcttcgtcccagcag
agctacctgtccatggaaaagataatgagagtcgccaaagcatcaagtgcacaggctatc
cacccaggatatggatttctgtctgaaaacactgaattcgcagaactgtgtaaacaagaa
ggaataatttttattggccctccgtcttcagccattcgagacatgggtataaaaagtaca
tcaaaacacatcatggcagctgcaggcgttcctataattgaaggttaccatggcgatgac
cagtcagaccggaaactgaaggaagaggctggaaggattggttttcctgtgatgatcaaa
gcagtgcggggtggtggtggcaagggaatgcgtatcgctggatcagaggcagagttccac
gataagctagaatccgcccgcagggaagcacgcaagtcttttaacgatgaagtcatgctg
gtggaaaagtttgtagaaaaccccagacatgtggaagtgcaggtgtttggggaccagcac
ggtaatgctgtctacctgtttgaaagagactgcagtgtgcaaaggagacatcagaaaatc
attgaggaggctcctgggcctggaatcagtccggaggttcgtcagaagctgggtgaggct
gcggtccgagctgctaaagctgtcaattatgtgggcgctggtacagtggaattcatcatg
gattgtcagcacaacttctacttcatggagatgaacacccgcctgcaggtggaacacccc
gtgtctgagatgatcacaggaacagaccttgtggagtggcagctgagggttgctgcagga
gaaaaactcccattgatgcaagaggaagtggagctgaagggtcattcatttgaggctaga
atttacgccgaagatcccagcaatgatttcctacctggagctgggccgctgctccatctg
tctactccaagaggggacgatttcattcggattgagactggagtaagacaaggtgatgag
gtgtctgtacactatgacccaatgattgctaagttagtggtctggggagaggatcgctct
gcagctttgaaaaagctgagatactgtctgcgccaatacaatattgtaggcctcagcacc
aacattgattttctgctgagtctgtctaggcacccagagtttgaggctggcaatgtgcac
accagcttcatccctcagcattacactgagctctttccagcccccaagaccacatctaag
gaagcgttgtgtcaggctgctttggggctgatactgagggagaaaaccatgacaagtaac
ttcatcacacattcagacgaccgatactctccattcgctttaagtaacggaaggagggta
aacattttatacacccgaaacctgacactgctggatggagaaaataagattgaagtagct
gtttgctacagtcaagatgggacttacagaatggagattgacggagaggtgttccaggta
tctggtgatttgatccatgaagaccaagcttcatacctgagatgctcaataaacggagtt
gcgtccaagcctaagctggtcatcctggataacgctgtccacttgttttccatggagggc
catgctgaggtggctttacctgtgcccaagttcttggctggtgttagtaccaccgcagca
cagggtgggaccgtggcacccatgacaggaaccattgaaaaggtattcgtgaaggcaggt
gataaagtacagattggagatcccttaatgatcatgctagcaatgaagatggagcatact
atccgggcaccgaaagctggagtcatcaagagagttttcttcaaagaaggttctcaggcc
aacaggcattcacctctagttgaactggaggaagagcaagccagctctgaatga
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