Polyodon spathula (Mississippi paddlefish): 121324325
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Entry
121324325 CDS
T07273
Name
(RefSeq) cation channel sperm-associated protein subunit beta-like
KO
K16893
cation channel sperm-associated protein subunit beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121324325
04040 Ion channels [BR:
pspa04040
]
121324325
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Sperm associated proteins
121324325
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
121324325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CATSPERB
CATSPERB_2nd
CATSPERB_1st
Sortilin-Vps10
Motif
Other DBs
NCBI-GeneID:
121324325
NCBI-ProteinID:
XP_041121983
LinkDB
All DBs
Position
12:12291800..12316105
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AA seq
1146 aa
AA seq
DB search
MLCPLEATLEEVPTQFQCNADKKSDRIRLYLGLKNLKISCYLQNDYSNSENQDIFSTLYT
SKGLAPSLKLYNRTHAVVFNFQMSLNTTTWSIDIPRNHITLNADVAPVDEWYLQFKMHHG
LDIFSTEGTLLDTVREPLLQWTIGTPISYSEVGTFINNAVNLQVSKSPCSNDVAILAPIF
APQTSAGCVTLSFIFVFTPIKISCLLCVSDCNGLAVADITLTSFNLLILTTRGLFISEDL
TSPVKSNLDFKKLDLPISTEVSDKADITWLNSKNKKYEHSFKYWIYLYTVKTRVIRIWRN
TVCIFLYPYFCISILLSCCRNTWNIYLMNINLLFFLLKVDHSHYTLLYTPLCPSNVESFH
EGYLSLTSSKQNANYQNLPCLYSTDPFTDWYRCLQHGNSSASLIYDSQQDTGIVLSLNKN
QGFVSVYSMINSQLNEKVKFSPFQFEFLPEGMSFDPSSHQLYVYGAEVWSSEDGGNTFKK
IISLASEKFVKLILCVHKQAVVFVTNYGNIYFSKTGSLRYSKLNKTKSEFSTLYCDHLGN
LILLALDAHSPNGLKVENINPASLMMDDDLGFDRPLALQYIRDKTALFHEFGPYLANPSA
ADSTPKLSNSYIGKLIQLSSGGRGVITEVYTTHISNKFLAVAVVDILETFNGEPLITDPN
QSYSLTVRDVSNSSVDIQLYNTDSTDGFQLTDIGKTIVIPGTSSFLITDVVNSNSVIAVS
TMPKLVRKDKTYNQAQWMLFNFGSGYERTWRITEGECRHSLQFFGDFDTNSLLYIVIQET
MSFSFKASVSESGMSYFQKKLMKVIVGNPSLLKVTAAHSWDTLGNHILNITVFSMFFQKG
MTTISVYVPEASLLCSLSSFTFSLQNSCPTSMRIKYIPDRLISADEWQYGNPVDSMGNKL
LMDLPVNYRPPSQLGIAIPVSDNIYNADPSKPRPRQYYQISKNTGTYKQCAGKSSQAECG
CTEEMRLSPLAAHSDCRKRVLRFLYPVNNFNITLFLTRSGHDNQPLKAPQFVTVTEINNR
TNWRITGTNAVPSLLKMREYLGTSLNSTLYNPEGLQISFYGSELFHFRISVIPGISLCDL
VEEVQIYIDGPPLAFPAQYLINTITAIVLGGILLIVFLLKLYGVKLPSKSSFTSLFRKRN
SVTPIS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtcctttggaggcgacattggaagaggtgccgacacagtttcagtgcaacgct
gacaaaaaaagtgaccgaatacgactgtacctgggattaaaaaatttaaaaatcagctgc
tatttgcaaaatgattacagcaattctgaaaaccaggacattttctcgactctgtatacc
tcaaagggactcgcaccaagtctgaagctttataataggacccatgcagttgtcttcaat
tttcagatgagcctgaatacgaccacatggagcattgacatcccccgcaatcacatcaca
cttaatgcagatgtggctcctgtggatgagtggtatttgcaattcaaaatgcatcacgga
ttggacatattcagcactgaaggcaccctcctggacacagttcgagagcctctccttcag
tggacaattgggaccccaatctcttactccgaggttggcactttcatcaacaatgcggtg
aacctccaagtttcaaaaagcccatgctctaatgatgtagccatcttggctccaatattt
gcaccccaaacatcagcaggttgtgtgacactgtctttcatatttgtttttacacccatt
aaaatatcctgtcttttgtgtgtttcagactgtaatggactggcagtcgctgatatcact
ctgaccagctttaatttgctaatcctgaccactaggggtctcttcattagtgaggatctg
acatccccagtaaaaagcaatttagatttcaaaaaattggatttacccatttcaactgag
gtcagtgataaagccgatataacgtggttgaattctaaaaataagaaatatgagcactcc
tttaaatactggatttatttatacacagtgaaaacaagagtaatcagaatctggagaaac
acggtctgtattttcttatatccatatttttgtatatccatacttctcagctgttgcaga
aatacatggaatatttatttaatgaacattaatcttcttttttttcttttaaaggtggat
cattcccattacacattgttgtacactcctttatgtccctctaacgtggagagtttccat
gagggttatttaagcctgacatccagcaagcagaatgccaattaccagaacttgccatgt
ctctacagcactgatcccttcacagattggtatagatgtctacaacacggaaatagttct
gcttcccttatttacgattctcaacaagatactggaatagttctgtccttaaataagaac
cagggtttcgtgtcagtgtactcgatgataaactctcagttgaacgaaaaggtcaagttt
tcaccattccagtttgaatttcttccagaaggaatgtccttcgacccaagcagtcatcag
ctttatgtctacggagcagaggtgtggtcttcagaagatggaggcaacacatttaaaaag
atcattagtttggccagtgaaaagtttgtgaagttaattttgtgtgttcacaaacaggca
gtggtatttgtaacaaattacggcaacatctacttcagcaagacaggttcgttgagatac
agcaagctgaacaagacaaaatcagaattctcaaccctgtactgtgatcacctgggcaat
ttaatcctcctggctttagacgcacacagtccaaatggactgaaagtggaaaacatcaac
ccagcttcattgatgatggatgatgacttgggctttgacagaccccttgcccttcaatat
atcagggacaagacagcactgtttcacgaattcggtccttatcttgcaaatccgtccgct
gctgactcaactcccaagctctccaactcctatattggcaaactgatacaactaagttca
ggtggaaggggtgtgataacagaagtctacacgactcacatatctaataaattcttggct
gttgctgttgtggatatactggagacgtttaatggtgaacctttaatcacagacccaaat
cagagttactcacttactgttcgtgacgtatcaaacagtagtgttgatatacaattgtat
aacactgattctactgatggctttcagctgacggatattgggaaaacaatagtgattcca
ggcaccagcagctttttaatcactgatgtggtaaattccaacagtgtcattgcagtttcc
acaatgccaaaattggtgcgtaaagataaaacctacaaccaagcacagtggatgctgttt
aactttggctctgggtatgaaagaacatggaggattacggagggggagtgcaggcacagt
ctgcagttttttggtgattttgacacaaattctctgttgtacatcgtaatccaagaaacg
atgagcttcagcttcaaggcttcagtctctgagtcaggtatgtcttattttcaaaagaag
ctcatgaaagtgattgtagggaatccttcacttctgaaagtgacagctgctcatagctgg
gacaccttaggcaaccacattctgaacattactgtcttcagcatgttttttcaaaagggc
atgactacaatatctgtatatgttccagaggcctccctgctctgctccttgtccagcttc
acattcagcctgcagaactcctgcccgaccagcatgcgtatcaagtacattccagatagg
ttaattagcgctgatgagtggcagtatggcaatccagttgactccatgggcaataaactg
ctgatggacctgccggtgaactacagacccccatcccagctcggaatagccatcccagtt
tctgataacatttacaatgctgacccaagcaagccacggcctagacaatattaccagatc
tctaagaatactggaacatacaagcaatgtgctggaaaatcgtctcaagcggaatgtggc
tgtacagaggagatgaggctttcgccgttagctgcacattcggattgcaggaaaagggtt
ttaaggtttttgtatcctgtcaacaattttaacatcaccttgtttctaacaagatctggg
cacgacaaccagcccctaaaggcgcctcagtttgtcactgtaaccgaaattaacaacaga
actaactggcgaatcacaggtaccaatgctgttccaagcctgctgaaaatgagggagtat
ctggggaccagtctcaacagcaccctgtataaccctgaaggactgcagatcagcttttat
ggctctgagcttttccatttcagaatatctgtcattccgggcatttctctgtgtgacttg
gtagaagaagttcagatttatattgatggtcctcctctggcatttccagcgcagtacctg
atcaataccataactgcaattgttctgggaggaatccttctgattgtttttctcttgaaa
ctgtatggagttaaattaccttcaaagagtagcttcacaagcctattcaggaaacgcaat
tcagtgactccaatcagttga
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