KEGG   Polyodon spathula (Mississippi paddlefish): 121327899
Entry
121327899         CDS       T07273                                 
Name
(RefSeq) DNA repair protein REV1-like isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    121327899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121327899
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    121327899
SSDB
Motif
Pfam: IMS IMS_C REV1_C BRCT BRCT_2 POLH-Rev1_HhH UBM LIG3_BRCT IMS_HHH PTCB-BRCT AdeT1_2 Cdd1 HHH_5
Other DBs
NCBI-GeneID: 121327899
NCBI-ProteinID: XP_041128156
LinkDB
Position
15:7135816..7176774
AA seq 1232 aa
MSRGGWRKRSSEEDGWGGMGGYMAAKVCKLEEQFKLEAPKQQQKEGTSSNIFSGVAIYVN
GYTEPTADELRRLMMLHGGQHHMYYSRSKTTHIIATNLPNSKIKELKGEKVVRPEWITDS
IKAGHLLSYVQYQLYAKQKGLNFNNVCKNEEPWLGPSNIHKEFENRVNGAAKSVPDPVRN
SKVNGLHGWENLDEEDEDSEFGELDPDSPLRNQKATDRPRDPPAMANGHAHRSNGALKPL
EQTLHSGKASVGNTQCLLLDEESIDFRDCGAQRQQHANQNSDAHSNSSHAANLSSLHSNI
KLNGAHHLTVQEPLHAKSTSELSPSKLSTAGLASSPAMARPGEPNFISEFYSHSRLHHIS
MWKCEFTDFVNMLQRQSNGLFPGREKIKKLSAERTSLLFTDTGLPTPTGPQKRQTCIMHV
DMDCFFVSVGIRDRPDLQGKPVAVTSNRGGGQAALRPGANPELEMQYYKQKYMKNKTDEK
VPDKMDFCTWENPGAACMNGVDLDRTALSMAEIASCSYEARQAGVKNGMFFGQAKQLCSN
LQSVPYDFHSYKEVALTLYETLASYTHDIEAVSCDEALVDVTDIMTELGVSADYIASVLR
AEIKDKTKCCASIGMGSNILLARMATRKAKPDGQYYLKPEEVDDFIRDQLVTSLPGVGRS
IGYKLSAMGVKTCGDLQQVSMHKLQKEFGPKTGQTLYRFSRGLDDRPVKTEKERKSVSAE
INYGIRFTQTAEAEAFLLNLSEEIQRRLVAAGMKGKRLTLKVMVRKAGAPVEPAKYGGHG
ICDNLARTVNLEQATDNSKVIGRETLKLFQMMKLNVLDMRGVGMQIQQLVPVLRTASVAS
VRDLLLAQKSKRPGSLAVAAPEVHESAECCDRSSSVRIAAVLSPQKTLSTLEPMPSTSRS
EPVVRYNGGLHTPHSIKTRLNLSIEIPSPSQIDHSVLEALPAEIREQVEQVYLSRSEETP
NGFVTAPESLGTLVLQVPEQLGQNNHSGIIVALPELSQVDPDVFSALPVELQEELKTAYS
QRQRAPEAPNNQQNTVVTRNTHLPLKQPLTVKTKKRNKKKNVVSLLKKTESPLKNKLLNS
PAKSSGIRTGSPQKLIVDFLKYEESTAEKLKLETGPSTSGLIPVPQEEASKVPVHQGPNL
AGAFELGDIKALLKEWVTSISDPMEEDILQVVRYCTDLIEDKDLEKLDLVIKYMKRLMQQ
SADSVWNMAFDFILDNIQVVIQQTYGSTLKIA
NT seq 3699 nt   +upstreamnt  +downstreamnt
atgagtcgaggtggatggaggaagcggtccagtgaagaagatggctgggggggtatgggt
gggtatatggctgccaaagtctgcaagctggaggagcagtttaaactggaagcacccaaa
cagcagcagaaggagggcacctcttctaatatcttcagcggagtggccatttatgtcaac
ggctacactgaacccacagcagacgagctgcggaggttaatgatgcttcatggaggtcaa
caccacatgtactactccagatctaaaaccacacatatcatcgccaccaatctgcccaac
agcaaaatcaaggagctcaagggagagaaggtagtacgaccagaatggatcacagatagt
ataaaggctggccatcttctttcatatgtccagtatcagctttacgccaagcagaaaggc
ctcaactttaacaatgtatgcaaaaatgaggagccttggctggggccaagcaatattcac
aaggagtttgagaacagggtaaacggtgcagcaaagagcgtgcctgatccagtcagaaac
tcgaaagtaaatggtttgcatggctgggaaaaccttgatgaggaagatgaagactctgaa
ttcggtgagctggatccggactctcctctgcgcaaccagaaagcaacggatcgccccagg
gaccctccagccatggccaacggccacgcgcataggtcaaacggtgccttaaaaccacta
gaacagacgctgcattcgggcaaggcttctgtgggtaatacccagtgccttctgttggac
gaagagagtattgacttcagagactgtggggcacagcggcagcagcatgctaaccaaaac
agtgatgcacattcaaactcttcccacgctgcaaacttgtcatctttgcacagtaatatt
aaactcaatggtgctcaccatcttactgttcaggagcctttacatgccaaaagcacttca
gagctgtcaccaagcaaactctccacagctggtcttgcctcttcccctgctatggccagg
cctggggagcccaactttatatccgaattctattcccactccagattgcatcacatatca
atgtggaagtgcgagttcacagattttgtgaacatgctccagcggcagagcaatggcctc
ttccctggcagggagaagattaaaaaactgagtgcagaaaggacctctctgcttttcact
gacacaggtttacctactcccactggtccccagaaacggcaaacctgtataatgcacgtg
gacatggactgcttctttgtgtctgtgggcattcgagatagacctgatcttcaagggaag
ccagtggctgtcaccagcaacagagggggtggacaagctgccctgcgcccaggggccaac
cctgagttagaaatgcagtattacaagcagaaatacatgaagaataaaacagatgaaaaa
gtccctgataaaatggatttctgtacatgggagaatcctggtgctgcttgtatgaacgga
gtggatctggaccgaactgctttatccatggcggaaatagcgtcttgtagttatgaagcc
agacaggctggcgtcaagaacgggatgttttttggccaggcaaagcagctatgctcaaac
ctccaatctgttccatacgattttcactcctacaaagaggtggcacttaccttgtatgaa
accttagcaagctacacgcatgacattgaagctgtgagctgcgatgaagccctggtagat
gtgactgacattatgactgagctaggagtgtctgcagactacattgcaagtgtactacgt
gccgaaatcaaagacaaaacaaaatgctgcgcctcaattggaatgggttcaaacattctg
ctggccagaatggcaacccgcaaagccaaaccagatggacagtattatttaaagccagag
gaagttgacgattttattagagatcagctagtcactagtctgccaggagtcggaaggtcg
attgggtataaactcagtgccatgggtgtgaagacctgcggggacctgcagcaggtctcc
atgcataaactgcagaaggagtttgggccgaaaactggtcagacactgtaccgcttctct
cgagggctggatgacaggccggtgaagacagagaaggagaggaaatctgtgtctgctgaa
ataaactatgggatacggtttacacagactgcagaagccgaggcgttcctgctgaacctc
tctgaagagatccagcggagactggtggcggcaggaatgaaggggaagcgactcactctc
aaggttatggtgcggaaagccggcgctcctgtggaaccggccaaatatggaggccacggc
atctgtgacaatttagccaggactgttaacctagagcaggccacagacaacagcaaggtt
atcgggagagaaaccctcaaattgttccagatgatgaaactaaatgtgttggacatgagg
ggggttggcatgcagatacagcagttggttccagtcttgagaacagcttccgtcgcctct
gtcagggatctcctcctagctcagaaatcaaagaggcctggcagcctagctgtcgcggct
cctgaagtgcacgagtcagcggagtgttgtgacaggtcctcctctgtgagaattgctgct
gtcttatcgcctcagaaaaccctgtcaacactggagcccatgccaagtaccagcaggtct
gagccggtggtccgatacaacggaggtctacacacaccgcacagcatcaagaccaggcta
aacctcagcatagagatcccatcgccttcacagatagaccactcagtgttggaagccttg
cctgcagaaatccgagagcaggtggagcaggtgtatttgagcaggtcggaggagacgcca
aacggatttgtcacagcgccagagtcactgggcaccctcgttctgcaggtcccagagcag
ctgggccagaacaatcacagtggcatcattgtagcactgccagaactctcccaggtagac
cctgacgtgttttcagcgttacctgtggagctgcaggaggagttgaagacggcctacagc
caacggcagagagcacccgaggcacccaacaaccagcagaacacagtcgtgacaagaaac
acacatctgccgctgaagcagccacttactgtgaagacaaagaagcgcaacaaaaagaaa
aacgtggtgagcctgttaaagaagacagagagccctctaaagaacaagctgctgaacagc
ccagcgaaaagcagtggaatcagaactgggagccctcagaaactcattgttgacttcctg
aaatatgaagaaagcactgcagagaaactaaagcttgagactgggccttccacgtcaggt
ctcatacctgttccccaggaggaagcctcaaaagtgccagtccaccaagggcctaacctc
gctggagcttttgagctcggagacatcaaggccttgctgaaggaatgggtcacctccatc
tcggatcccatggaggaggacattctgcaggttgtgaggtactgcacagatcttatagaa
gacaaagatctggaaaaactagacctcgtcattaaatacatgaaaagactaatgcagcag
tcagcggattcagtctggaacatggcatttgacttcattcttgacaacattcaagtggta
atacagcaaacctatggtagcacattaaaaattgcatag

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