Polyodon spathula (Mississippi paddlefish): 121327948
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Entry
121327948 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: radixin-like
KO
K05762
radixin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04530
Tight junction
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121327948
09142 Cell motility
04810 Regulation of actin cytoskeleton
121327948
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121327948
04147 Exosome [BR:
pspa04147
]
121327948
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
121327948
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121327948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERM_C
FERM_M
ERM_helical
FERM_C
FERM_N
PRIMA1
Motif
Other DBs
NCBI-GeneID:
121327948
NCBI-ProteinID:
XP_041128248
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All DBs
Position
15:6596991..6635841
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AA seq
587 aa
AA seq
DB search
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYTTWLK
LNKKVTQQDVRKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDENYCPPE
TAVLLASYAVQAKYGDFNKEIHKPGYLSNDRLLPQRVLEQHKLTKEQWEERIQTWHEEHR
GILREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHEDKLTPKIGF
PWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTI
EVQQMKAQAREEKHHKQIERAQLENEKKKRQLAEQEKERIEREKDELIERLRQIEEQTIK
AQKELEEQTRRALELDQEKKRAKEEAERLERERQSAEEARLALAKQAADQMKNQEQLAAE
LGEFTAKIALLEEAKRKKEEEASEWQHKALSAQDDLERTKEELKIVMSMPPPPPPPPPPP
PMVAPLENEHDEQDENSAEASAELSNEGVNNHRSEEARLTETQKNERVKKQLQALSSELA
QARDDTKKTQNDVLHAENVKAGRDKYKTLRQIRQGNTKQRIDEFESM
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaccgatcaatgtgcgggtcactacgatggatgcagagctggagtttgctatc
cagcccaatacaactggcaagcagctatttgaccaggtggtaaagacagttggacttcgt
gaagtctggttctttgggctacagtatgtggatagcaaaggttacacaacatggttgaaa
ctgaacaaaaaggtaacgcaacaagatgtcaggaaagagaaccctctgcagttcaagttc
cgggcaaaattcttccctgaggatgtgtcagaggagctgatccaggagatcacacagagg
ctgttcttcctgcaggtgaaggaggccatcctgaacgatgaaaactactgccctcctgag
accgccgtcctgctggcttcttacgccgtgcaggccaagtacggtgatttcaacaaagag
atccacaagccaggctatttaagcaacgacaggctccttcctcagcgggttttggaacaa
cataaactaaccaaagaacagtgggaagaaagaatacagacctggcatgaggaacataga
ggaattctaagagaagattcgatgatggagtatctgaagattgcacaggatctggagatg
tatggcgtgaactactttgaaattaagaacaaaaagggaacagagctgtggctgggtgtt
gatgcgctggggcttaacatttacgaacatgaagacaagttgacaccgaagattggcttc
ccttggagtgaaattagaaacatttcatttaatgacaagaagtttgttatcaagcccatt
gacaaaaaagctccagactttgtgttctacgcccctcggctgagaataaacaagcgcatc
ctggcgttgtgcatgggcaaccatgagctgtacatgaggaggaggaagccagacacaatc
gaagtgcaacagatgaaggctcaggccagggaggagaagcaccacaaacagattgagaga
gcacagctagaaaacgagaagaagaaaagacagttggcagagcaagaaaaggaaagaata
gagcgggagaaggatgagctgattgagcgactcagacaaattgaagaacagacaatcaag
gcacaaaaagagctggaggagcagaccagacgggctctggaactggaccaggagaagaag
cgagcgaaggaggaggcagagcggctggagagggaacggcagagtgccgaggaggcccgg
ttagcactagcaaagcaggccgcggaccagatgaagaaccaggagcaactggctgctgaa
ctcggtgaatttactgccaaaatcgccctgctcgaggaagccaagaggaaaaaggaggag
gaggcatctgagtggcagcacaaagcgctctcggcacaggacgacctggagaggaccaag
gaggagctgaagattgtgatgagcatgccgccgccaccccctcctcctcctcctcccccc
cccatggtggcccctctggagaacgagcacgacgagcaggatgagaacagcgcagaggcc
agcgcagaactctccaacgagggcgtcaacaaccaccgcagcgaggaggcgcgcctcact
gagacccagaagaacgagcgagttaagaagcagctgcaggctttgagctctgagctggcc
caggctcgggatgacaccaagaaaactcagaacgatgtcctccatgcagagaatgtgaag
gcaggccgtgacaagtacaagaccctgcgacagatccggcaaggaaacacaaagcaacgc
attgacgagtttgagtccatgtga
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