Polyodon spathula (Mississippi paddlefish): 121329942
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Entry
121329942 CDS
T07273
Symbol
sec23a
Name
(RefSeq) protein transport protein Sec23A
KO
K14006
protein transport protein SEC23
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121329942 (sec23a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121329942 (sec23a)
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121329942 (sec23a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
121329942
NCBI-ProteinID:
XP_041131975
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Position
17:28527115..28543302
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AA seq
765 aa
AA seq
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MATFQEFIQQNEDRDGVRFSWNVWPSSRLEATRMVVPVSTLFTPLKERPDLPPIQYEPVL
CSRATCRAVLNPLCQVDYKAKLWACNFCYQRNQFPPTYAGISEMNQPAELLPQFSTIEYV
VQRGPQMPLIFLYVVDTCMEDEDLQALKESLQMSLSLLPPTALVGLITFGRMVQVHELGC
EGISKSYVFRGTKDLSAKQLQEMLGLTKPASTQAGRGPQVQQPPPSNRFLQPVQKIDMNL
TDLLGELQRDPWPVTQGKRPLRSLGVALSIAVGLLECTFPNTGARIMTFIGGPATQGPGM
VVGDELKTPIRSWHDIEKDNAKFMKKGTKHYESLASRASTSGHIIDIYACALDQTGLLEM
KCCSNHTGGYMVMADSFNTSLFKQTFQRVFTKDVQGVFKMAFGGTLEIKTSREIKISGAI
GPCVSLGAKGPCVSENEIGTGGTCQWKICGLDHNSTLAIYFEVVNQHNAPIPQGGRGAVQ
FVTQYQHSSGQRRIRVTTIARNWADAQTQIQSIAASFDQEASAILMARLAVYRAETEEGP
DVLRWLDRQLIRLCQKFGDYHKDDPTSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDES
SYYRHQFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILPDRILLMDTFFQILIYH
GETIAQWRKAGYQEMTEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLS
KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccttccaggagttcattcagcagaatgaggaccgggatggggttcggtttagc
tggaatgtttggccgtcaagccgcttggaagccacgagaatggtggtccccgtgtcgacc
ctgttcacaccattaaaggaacggcctgatttaccacccattcaatatgaaccagtcctg
tgtagcagggcgacttgcagagcagttttaaatcccttatgtcaagtggattataaagca
aagctgtgggcttgtaatttctgttatcagagaaatcagtttccacctacgtacgctggg
atttcagagatgaaccagccagctgagcttcttcctcagttttccacaattgaatatgta
gtacagcgtggccctcagatgcctttaatttttctgtatgttgttgatacctgtatggaa
gatgaggatttacaggcactcaaagagtctttgcagatgtccctcagtcttctacccccg
actgctttggtgggacttattacctttggaagaatggtacaggtccatgaactaggttgt
gaaggaatttctaagagttacgttttcagaggaacaaaagatctaagtgctaaacaactc
caggaaatgctgggcttgactaaaccagcttcaacacaggcaggtcgaggacctcaggtt
caacagccacccccctccaacagatttttgcagcctgtgcaaaaaattgacatgaattta
acagaccttttgggagagctgcagcgcgatccatggccagtaacacaaggcaaaagaccc
ttgcgatctttaggggtcgctctttccattgctgttggcttgctggagtgtacattcccc
aacaccggagctcgcatcatgaccttcataggaggaccagccactcagggacctggaatg
gttgttggtgatgaactgaaaacgcccatacggtcctggcatgacattgaaaaagataat
gcaaagttcatgaagaaaggaacaaagcactatgagtcactggccagtcgagcctctaca
agtggacatataattgacatctatgcttgtgcactggatcaaactgggctacttgagatg
aaatgctgttccaatcacacagggggctatatggtaatggcagactcctttaacacatct
ttgttcaagcaaacgtttcagagagtttttaccaaagatgttcagggcgtttttaaaatg
gcttttggaggcacattggaaataaagacttcaagggaaatcaagatttctggagcaatt
ggcccctgtgtgtcactcggtgccaaaggaccctgtgtatcagaaaatgagataggaaca
ggtggcacttgccagtggaagatctgtggtcttgatcacaactcaaccctggcaatatat
tttgaggtggtgaaccagcataacgcaccaatacctcagggtggacgtggtgctgtccag
ttcgtgactcagtatcaacattccagtggacaaagacgcattcgagtcaccacaattgca
agaaattgggcagatgcacagacacagatacagagcattgctgcatcatttgatcaggaa
gcctctgccatccttatggccagactggcagtttacagagctgagacagaagaaggacca
gatgtgttgcgctggttagacaggcagcttattcggctgtgccagaaatttggagattac
cataaggacgatcccacttcctttagattctcagaaacgttctcactttatccccagttc
atgtttcatctgagaagatcaccatttttgcaagtttttaataacagtcctgacgagagc
tcatattatcgacatcagtttatgcggcaagacctcacacagtcactcatcatgatccag
cctatcctgtatgcctattctttcagtggacctccagagccggttcttttagacagcagc
agcattctgccggatcgcattctgctgatggacacgttctttcaaatccttatataccat
ggagagactatcgcccaatggcgcaaggctggatatcaagagatgacagaatatgaaaac
ttccgacacctgcttcaagctccagtcgatgatgctcaagagattcttcatagtcgtttc
ccaatgcccagatatatagacactgagcatggaggcagccaggctagatttcttttatct
aaagtaaacccttctcagacacacaacaacatgtatgcatggggccaggaatctggagca
ccaatccttactgatgatgtcagcttgcaggtgtttatggatcatttaaagaaacttgct
gtttccagtgccgcttaa
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