Paenibacillus spongiae: L1F29_03445
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Entry
L1F29_03445 CDS
T09530
Name
(GenBank) S-layer homology domain-containing protein
Organism
pspn
Paenibacillus spongiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Big_1
Invasin_D3
Trypan_PARP
DUF4352
Motif
Other DBs
NCBI-ProteinID:
UVI30937
LinkDB
All DBs
Position
779562..789362
Genome browser
AA seq
3266 aa
AA seq
DB search
MRNFMNFGAFKKIVSCLLVFVLVATNITTAAFAATPGEGRGDDSYNAELLRLLSDEYGAE
QAPAMLETIQKLGLANANGQLLNYSIIINNKSYTVEELKQLFADENTDLTQMAEVDGEPI
TLAALKEMIAIEERLSSLLSAGAEGGTGLSSEHLDNLDSLLSQVDGEGGLRFVDENGNPM
MGARGLSAAAGTDYEDETVVSVTKLVEATGVSFTETVSFTFELNKAQSKPVSFSYELMDS
TLHIQPRNNQVIKGTVEFQPGETTKTITFNGLYVQRNIIQSYCVSGRNDFSTNPGALSTY
QNYVWTSYGRADYLHFSNFNNFDRMDFDQLETTRDYVPFTHAYEGGGYLSFTLGTGQGLY
KSDSLNGVGFGACYSRGDTLYGDRVAWKQEPVMKEVKAQAGSYTTGQIIPMQVLYSNIIS
REQPRDPASRPRLSLVGGGVAYPDVMPFADFTRPEVYNLAYPSLSLIGGYMAVVGKGMTS
ADMNVVDAVDETAAMWGTTTSPYEYRKIAPISWGKDFTNTPNIVINPARGDAFQSLTLEQ
PSYTVGQTLKATLQLSNDNGEADWLIDGVTTSEEIAKRVMISIGDKNQGRLDLHWKLGGD
GLPLSPPVLEGELQITKSVYDTLKDADANVDGKQLRAKVYYNRNMTPGALDAGNKDDFGM
MANQTVNFQVGEPKFITPADLSITYPASWPSGTPYVVNLIDATATKLGFTYPLDATHVTP
DQFEWRSSDASVAGITADGTILPKGAGTVIFTLAAKNNGEAAEATVTSQTITISADGSAA
VVVPSFANRVYVNKSKDANIIWSTNVMDRYKELAGAGGVVQDANFKLEFFEGFFDEAQLA
GKQPTQTWEAPAIAELINATSFRIPGSYIKDISNSNVPSYTVRISTVNPENALSTLSAVS
YIVVRSEAAIVTLDKSMGQFVLDSVGTLPVAWTLDNFDPVNKGEFEFQVTRNGVLIPESR
IVFDKATGQFSDAQVTATGGSYNLNLAPVTGSKQIKDVYTITLAVKNSTDSTWSYDSLFL
QVYKSDALQIQIDGQPTASYKMSNIDRIKQMTSDQILALKRNIMLNNELGVNNKDYDDLG
EITDQIAWKSSNNKTGAIYHRSNGYVEDIEKFNNSSYQPKQKFLLGGLSDGQTTITATHA
RTGIKAELDLTVETLKDKLYLFQLYPKTETTLTYTNGTGAEKSVKSDANGELALYEESGI
ASDVYVTSVFNGTTYTGVLSQDRLLSQEGNPAQLELYPINILQLRQLSKVEVFFKTPDGK
PYTGKVTYRGGVYKNGYYAEATEIGGAGITETLAGDGKLEIIFDTTDFYSVAAGEKNAAD
LSAKDKLEFIIETRFDDDRYNPSLISLDGDASPVDRIVIGDKIARMISNDRQQPTPVIVN
QVVANSDQSSKTDIRDYRGKFGPNNTYPSIQLTTELLWWGEEADKEAYAQLESSTGLVPQ
GQSYQTLKYPFSDLWLTRHVQVLNKDTIWLDKARSGSVHFKLYDKPGSFRKSFTSTATLV
NMIGVSEVSVSELRSGIQKLKNDMNSTNGSTNGPSNNDKVVLETLSLLGNLKMDVGPLSM
RVYPTDDPTVFKMIMSASLNKMASTQGSSDVQFFQSKNNFAPGAGDLYKIAMGQFVEDQK
RQYSQVNKDQHSGKNIPFSAGGYYIGEIKYNLKTDAWEAVVHGGGFNAGGGFEYSWAWNI
QAGIVPVTFSLTIGGGVEVGFRASVLFDEVPGNPWSNPQLDSVNDYLTSLRVIAYIEAFG
GIGFDYSIIAAKIGVFGRITLENTSTWLNRDYLKNSNDRVLYGNKLTMESIVGVRVVIKF
LFISIKHDFASLRYSHTWLSKNWNKIQDYWKENATMPLMASNAEVAIMAYMRSIGEDPMQ
VLSSQTMEDRSYLNEYDRAWQQAPTGAKRSLLAAAPSGPQVLQSNAYPYSNPQVAADGSL
FVYLSDNNSANVEDTVASWAVRNGQGGYDQRGEIVTDAALKGYGDTGLQLAGEGNLIAAV
WVRQKDKINKEAGEELTGADMLLMNNSAEVMVSIYDGTKWTTHRLTNNQSPDVAPIVSVG
NGKVVVAYRSVYSSNVENPLDFSESDSIVYKVYDTASGVWSDTETLYNGTNGTVMGMSAE
TLTDGTAAVVYTVNKGNTNQIPAEQYVAGTDNEIVYAVIDTSPDPTAQTSGWKTKGVVKN
LQVTHDRNANENPQLTSAIFPDGIERFVMAWYATSGEDDSAAEDIRMLAVNRDGEVYSEF
VDSLSAVKAYNNVRINPNFVFAKMPQADRKLEHLSLIWKEAQVETTSGNVISRDVLKAVK
LGMNGGELYLSGVMELGAMPEDTAIDTIAAYIGNSSGTEINALLLGTTYTTDTEVVGAIT
PKEEGEAGGNAIPVTVSKAVSAMYTASATYHNQFNAEHVVYNPGEIVAGYELPIQFNVVN
QGLSAIQSVDITINGELTNYNNLSLVPNSAKGLIAYHTVPSPIADAPYQIEVAFADGERQ
STAGILRLDVPDTGISKIKVMKEEGGKRILSIPVYNKNGTTSVNKGRVVKLALYEDNQFT
DDSRIGNVIEISDADDLSLVDQGAYVETVEFDVRAYLTKHGLQEIPDNGITVYLRSWAED
AQGEPLKEFDESDNEAKVTLDNLALKYNENQVLLTMEQTNTASRTNVDLTMQNMNMASIS
SGNVLLNLLDAEGQILETKYVATDAAGLLSFSAEEKKTATIQFGKAGHSVQGMFFQESAD
ALDATLSTVALSGIELDFDPGQTAYALQSSDLKRTHIVAVASNSGATVSLLDGEGNVIRS
NKGFVSVDKPLELSTGGALNEFTISVQPASAAGTAMAYPIALTNTQSSKPHLEVQVKGTK
GADGKYADDVELSLSPYDVEGFEIDKAQYQINNGNWTTAAYNGKTGQKLTTLSGEGSYRI
AAKIILASGLAYELDPVTLEIGGPVIEPVDAAASSATASKTKVIADGKDQATIKVIFKNA
GGNALSGRQVILTADGGSSKITAVEDTTNAKGEASFTVTNTVVESVRYTAKDAVGGVTLS
PVQVSFESRTDSGTGTGTNPNPGTDPSPGTDPKPDPGTDPEPKPKPDDSSSLLFKKGLIA
FEELLRSIKEKLQSTANLDTAAMFTDIQKHWALKSIDKLVRLEVIKGYGDSRLKPNNPIT
RAEFASMLARLFVFAPTDAKPAKFADVQGYWAEGAIDTLTKHGILKGYQDGTFKPNAAIT
REEMIVILMRLINEATLPQSGSTDFQDLSLAGKYARDSLMAAAKAGVIQGYGNSLNPKGN
ASRAETATMLLNLLKLEPRLQEVLEP
NT seq
9801 nt
NT seq
+upstream
nt +downstream
nt
ttgcggaatttcatgaatttcggtgcattcaaaaaaatagtctcttgtctgttggtgttc
gtgctggtggcgacgaacataacgacagcggcattcgctgcgacgccgggggaaggacgc
ggggatgattcttacaatgcggagctgcttcgcttgttaagcgatgaatacggagcagag
caggcgcccgcgatgctggagacgattcagaagcttggcctggcgaatgcgaacggtcaa
ctgctgaactactctattattataaataacaagagctatacggtagaggaactgaaacag
ctatttgcagatgagaacaccgacttgacgcaaatggccgaagtcgacggcgagccgatt
acgcttgcggcgctcaaggagatgatcgcgattgaggaacgcttgtccagcctgctatct
gcgggagcagaaggaggaaccggcttgtcctccgagcatctggacaacctcgactccttg
ctgtcgcaagtcgatggagagggcggattgcgttttgtcgacgagaacggcaatccaatg
atgggagccagagggctctcggctgcggcgggcacggattacgaggatgagaccgtcgta
tcggtcacgaagctggtagaagcgacaggcgtttccttcacggaaacggtcagtttcaca
ttcgagttgaacaaagcacagagcaaaccggtatccttctcctacgaactgatggacagt
acgcttcatattcaaccgcggaacaatcaggtcattaaaggaacggttgaatttcaaccg
ggcgaaacgactaagacgattacgttcaacggtttgtatgttcaacgaaatattattcaa
tcttactgtgtatctggaagaaatgactttagcacgaatccaggcgctttaagcacctat
caaaattatgtgtggaccagctatgggcgggccgattatttgcatttctccaactttaat
aatttcgatcggatggattttgaccaactggagacaacccgggattatgtgccgtttacc
catgcctatgaagggggcggctacctttccttcaccttaggtacaggacaagggctctat
aaaagcgattcgctgaatggcgtcggctttggagcctgctactcccgtggcgacacattg
tacggtgaccgagtggcttggaagcaggagcctgttatgaaggaagtcaaggcgcaggca
ggcagctatacgacagggcagattataccgatgcaagtgctgtatagcaatattatttcg
cgtgagcagccgagggatccggcgagcaggccaagattgtcgctcgtcggaggcggcgtt
gcttatccggatgtcatgccttttgcggattttaccagaccggaagtttacaatctggcc
tatccaagcttgtctctcattggcggttatatggcggttgtcggcaagggcatgacatct
gctgatatgaacgtcgttgacgcagtagatgaaacggcagccatgtggggaacaacgacc
tctccttatgaatatcgcaaaattgcccccatttcatggggcaaggactttacgaatacg
cccaatatcgttattaatcctgcgcgaggcgatgcttttcaatcgctgacgctggaacaa
cccagctatacggtcggtcagacgttgaaagcgacgcttcagttgagcaatgataacgga
gaagcggactggttaattgatggggtaacgacttccgaggaaattgccaagcgagtcatg
atttcaatcggcgacaagaatcaaggccgtcttgatttgcactggaagctcgggggagac
ggactgcctttgtcccctcctgtactggaaggggaattgcagattacgaaaagcgtctat
gatacgttaaaagacgcagatgccaacgtggacggcaagcagcttcgggccaaagtgtac
tacaaccgcaatatgacgccgggggcgctcgatgcgggcaataaggacgatttcgggatg
atggccaatcaaacggtcaacttccaggtgggagagccaaagtttattactcctgccgat
ttgtctattacttaccctgcatcttggccgtccggcacgccgtatgtggtgaatttgatt
gatgcaacggcaaccaagctgggtttcacttatccattggatgctacgcatgtgacaccg
gatcagttcgaatggcgcagcagcgacgcttcggtcgctgggattaccgccgacggcacc
attcttcctaaaggagcgggtacggttatctttacgctggcagccaaaaacaatggagaa
gcggcggaagcgacagtcacttcgcagacgattacgattagcgcggacggctcagcggcc
gtggtcgttccgagctttgccaatcgcgtatacgtcaacaaaagtaaagacgcgaacatc
atttggtcaaccaatgtgatggatcgttataaagagttggccggcgcgggcggcgtggta
caagacgccaacttcaagctggagttcttcgaagggtttttcgatgaggctcagcttgcc
gggaagcagccgactcagacttgggaagccccggccattgccgaattaatcaatgccaca
agctttaggattccgggctcctatatcaaggacatttcaaacagcaatgtgcctagctat
acggttcgcatcagtacggtcaatccggaaaatgcgctgtccacgctttccgccgtatcc
tatatcgtcgtgagatcggaagcggcaatcgtcacgctggacaagtcgatgggacagttt
gtgctcgattccgtcggcacgctgcctgttgcatggacgctcgacaatttcgatccggtg
aataaaggtgaatttgaattccaggtgacaaggaatggcgttcttattccagaaagccgt
atcgtattcgataaagcgacaggccagttcagcgatgcgcaagtgacggcaacgggcgga
agctacaatttgaaccttgctcccgtgactggaagcaagcaaatcaaggatgtatacacc
attacgctggccgtgaagaacagcacggattcgacatggtcgtacgactcgttgtttttg
caagtctataagagcgatgctctgcaaatccagattgacggtcagccgaccgcctcctat
aagatgagcaatatcgaccgcattaagcagatgacgagcgatcagattcttgcattaaag
cgaaatattatgttgaacaatgagctgggcgtcaacaacaaggattacgacgatctggga
gagattacggaccagatcgcctggaaatcctccaacaataagacaggcgcaatttatcat
cgcagtaacggctatgtcgaagatattgagaagttcaataattcttcctaccagccgaag
caaaaatttctgttgggcggcttgagcgacggccaaacgacaattacagccactcatgcc
cgtacaggtatcaaagccgagctggatctgaccgtcgagacgttgaaggataagctatat
ttattccaactgtatccgaagacggaaacgaccttgacgtatacgaacggcacgggcgcc
gaaaaatccgtgaaaagcgatgccaacggagaattggcgttatatgaggaaagcggcatt
gcgagcgatgtctatgtgacttccgtctttaacggcacgacctacacaggcgtgctcagc
caggacagactgctatcgcaggaaggaaatccagcgcagctggagctgtatccgattaat
atcctgcagcttcgtcagttgtcgaaggtcgaagtgttctttaagacgcccgatggcaag
ccgtacaccggaaaagtgacctatcgcggcggcgtatacaagaacgggtattacgccgaa
gcgacagagatcggcggcgcgggcattacggagactctggcaggggacggcaagctggag
atcattttcgatacgacggacttttattccgttgccgccggggaaaagaatgccgcggat
ttatccgctaaggacaagcttgagttcattatcgaaacccgattcgatgacgaccgctac
aatccaagtttaatctcgctggacggagatgcgagcccggtcgaccgcatcgtcatcggc
gacaaaattgcaagaatgatcagcaatgatcggcagcagccgacgcctgtgatcgtgaat
caggttgtcgcgaatagtgatcagagttccaaaaccgatattcgggattatcgcggcaag
ttcgggcctaataatacttacccgagcattcaattgacgaccgaattgttgtggtgggga
gaagaggcggataaggaggcttatgcccagctggaaagcagcacaggccttgttccgcaa
gggcaatcctaccagaccctcaagtatccgttctcggatttgtggttgacgcggcacgtt
caagtactgaataaggatacgatctggctcgacaaggcaagatcgggatcggttcatttc
aagctgtacgacaagccgggcagcttccgcaaaagcttcacgtcgacggcaacgctcgtc
aatatgatcggcgtatccgaggtcagcgtttcggagctgcgttccggcattcagaagctg
aagaacgatatgaacagcaccaacggaagcacgaacggaccgagcaacaatgataaggtc
gttctggagacgctgagcttactagggaatctgaaaatggatgtcggtccgctctccatg
agagtgtatccaacggatgacccgacggtcttcaagatgattatgtcggcttccctgaat
aagatggcgtcgacgcagggcagcagcgatgtgcagttttttcaatcaaagaacaacttt
gctcccggagccggcgacctgtataagatcgcgatgggccaatttgtggaagaccagaaa
cgccagtattcgcaagtcaataaagaccagcattccggcaagaacatcccgtttagcgcc
ggcggatactacattggagaaatcaagtataatttgaaaaccgatgcctgggaagccgtc
gtgcatggcggcggattcaatgcggggggaggcttcgagtattcgtgggcctggaacatt
caggcgggtattgtaccggttacgttctcgctaacgattggcggcggcgtcgaggtcgga
ttcagagcttccgtcctgttcgatgaagtgccgggcaatccatggagcaatccgcagctg
gacagcgtcaacgattatttgacctcgctgcgcgtcattgcttatatcgaagcgttcggc
ggaatcggctttgattattcgattatcgcggccaaaattggcgtgttcggcaggattacg
ctggaaaacacaagcacatggctgaatcgggactatttgaaaaacagcaacgatcgcgtg
ctgtacggcaataagctgacgatggaaagtattgtcggcgtgcgcgtcgtgattaagttc
ttgtttatctcgattaagcatgactttgcttctctgcgttacagtcatacatggctgtcg
aaaaactggaacaaaattcaggattactggaaagaaaatgcgaccatgccgctgatggcg
tccaatgcagaagttgccattatggcttacatgaggtccatcggagaagatccgatgcag
gtgcttagctcgcagacgatggaggatcgcagctatttgaacgaatacgatcgcgcgtgg
cagcaagcgccaaccggcgcgaagagaagcttgcttgccgcagctccaagcggaccgcag
gtgctgcaatccaatgcgtatccgtattccaacccgcaggttgccgcggacggctcgctg
ttcgtctacctgtccgacaacaacagcgcaaatgtggaagatacggtcgcctcttgggcg
gttcgcaacggccagggcggctacgaccagcgcggagagattgttaccgatgctgcgctt
aagggctatggagatacaggactgcagcttgccggcgagggcaatctgatcgccgctgtc
tgggtcagacagaaggataaaatcaacaaggaagccggagaagagctaactggcgccgac
atgctgctaatgaacaacagcgccgaggtgatggtttccatctatgacgggacgaagtgg
acgacacatcggctaacgaacaaccaaagcccggatgtggcgccgatcgtctcggtgggc
aatggcaaggttgtcgtcgcttaccgcagcgtatactcgtccaatgtcgaaaatccgctt
gatttctccgaatcggacagcattgtatacaaggtatatgatacagccagcggcgtttgg
agcgataccgagacactgtacaacggtacgaacggtacagtaatgggcatgtcggcagaa
acgttgaccgacgggacagcggctgttgtctatacggtcaacaaaggcaacacgaatcaa
attccggcagagcagtacgtcgccggaacggataacgagattgtgtatgcggtcatcgat
acgtcgccggatccgacagcccagacgtcaggctggaagacgaagggcgtcgtgaaaaac
ttgcaagtgacccatgaccgcaacgccaatgagaacccgcagttaacgagcgccattttc
ccggatgggattgaacgctttgttatggcttggtatgcgacaagcggcgaggacgacagc
gctgcggaagacatcaggatgctggcggtgaatcgggacggcgaagtctattcggaattt
gtggacagcctgagcgctgtgaaggcgtacaataacgtcagaattaatccgaactttgtg
tttgctaaaatgccgcaggcagacaggaagcttgagcatctgtcgttaatttggaaggaa
gcgcaggtcgagacgacatccgggaatgtgattagccgcgatgtgttgaaggcagtgaag
ctcggcatgaacggcggggaattgtatctgtcgggtgttatggagctaggagcgatgccg
gaagataccgctattgatacgattgcagcgtatatcggcaacagctcgggtacagaaatt
aatgcgctgttgctgggcacgacgtatacgaccgatacggaggttgtgggtgccattacg
ccgaaggaggaaggggaagcgggaggaaatgcgattcccgttaccgtatcaaaggcggtt
agcgctatgtataccgctagcgcaacgtaccataatcaattcaatgcggagcatgttgtc
tataatcccggcgagatcgtagccggctatgaattgccgattcagttcaatgtcgtcaat
caaggcttatccgcgattcaatcggtggacattacgattaatggagagctgacgaattac
aataatctgtcacttgtgccgaacagcgccaagggcttgattgcctatcacaccgtgcca
tcgccgattgcggatgcgccttatcagatcgaggttgcttttgccgatggcgaacgacag
tcgacagcaggcatactgcggctcgatgtgccggatacgggaatttcgaagattaaggtc
atgaaggaagagggcggcaagcgcatcttgtccattccggtctacaataagaatggcacg
acgtcagtcaacaagggacgcgtcgttaagcttgcgctgtatgaagataaccagttcacg
gacgattcgagaattggaaatgtgattgagatatcggatgcggacgatttgagcttggtc
gatcaaggcgcatatgtcgagacggtggagtttgatgtccgcgcttatttgaccaagcat
ggcttgcaggaaataccggataacgggattacggtttatttgcgcagttgggcagaggat
gcgcaaggcgagccgttgaaggaatttgatgagtctgacaacgaagcgaaagtgacgctc
gacaatttggcgttgaagtacaatgagaaccaggtgctgctgacgatggagcagacgaat
acggcttcccgtacgaatgtggacctgaccatgcagaacatgaatatggcttcgatctcg
tccggaaacgtactgctcaatctgctcgacgccgagggtcaaatcctggagacgaagtat
gtggcgaccgatgcggcagggctgctgtcgttctccgcagaggagaagaagacggcaaca
atacagttcggcaaggctgggcattccgttcaagggatgttcttccaggaaagcgcagat
gcgcttgatgcaacgttaagcacggttgcgctcagcggaatcgagttggacttcgatccc
ggtcaaacggcatatgcgctgcaatccagcgacttgaagagaacgcatatcgttgcggtg
gcgtccaacagcggggcaactgtctctctccttgatggcgagggcaacgtcattcgttcg
aacaaaggcttcgtgtccgtggataagcccttagagctgtcgaccggcggcgcgttgaat
gagtttacgatctctgtacagccggcaagcgcagcgggaacggcaatggcctatccaatt
gctcttacgaatacccaatcgtccaaaccgcatcttgaagtgcaggttaagggtactaag
ggggcggacggcaagtacgccgacgatgtcgagctttcgctttctccgtatgacgtggaa
ggctttgagattgacaaagcgcaatatcagatcaataacgggaattggacaacggctgct
tacaacggaaaaaccggacagaaattgacgaccctatcgggagaaggaagctacaggata
gcggctaaaataatattggcatccggtctggcctacgagcttgatcccgtgacgcttgaa
attggcggtcccgtcatcgaacctgtggatgcagcggcatctagcgcgacggcttccaaa
acaaaggtcattgccgacgggaaggatcaggcaacgatcaaggtgatcttcaagaatgca
ggcggcaatgcgctaagcgggcgtcaagtcatactgactgcggacggcggcagctccaag
attacagccgtggaggatacaacgaatgctaagggcgaagcgagctttacggtgacgaat
acggtagtagaaagcgtccgatacacagcgaaggatgcagtcggcggggttactttgtca
cccgtacaggtaagctttgagagccgaacagattcgggaacgggaaccggtacgaatccg
aatccgggaacggatccgagtccgggaaccgatccgaagccggacccgggaaccgatcct
gagccaaagccaaagccggatgactcttcatccctacttttcaaaaaagggctgattgca
ttcgaagaactgctgcgctcgatcaaagagaagcttcagtccacggcaaacttggatact
gcggcaatgtttacggatattcagaagcattgggcgctgaagtccattgataagcttgta
agactagaggtcataaagggatatggcgatagccgccttaaaccgaataacccgatcacc
agagcggagtttgcttcgatgctggcacggttgttcgtgtttgcgccaacagatgccaag
cctgcgaaattcgcggatgtgcaaggatattgggcagaaggggcaatcgataccttgacc
aagcacggtatccttaaaggctaccaagatggaaccttcaagccgaatgcggcgatcacg
cgcgaagaaatgatcgtcatcctgatgagactgatcaatgaagcaacacttccgcaatcc
ggcagcacggactttcaggatttatccctggcaggaaaatatgcaagggattcgttgatg
gcagcggcgaaggctggagtaattcagggctacggaaattcccttaaccctaaaggaaat
gcgagccgcgcggagacggcgacgatgctgttgaacctgctgaagctggagcctagactg
caagaggtcctggaaccgtaa
DBGET
integrated database retrieval system
