Paenibacillus spongiae: L1F29_07325
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Entry
L1F29_07325 CDS
T09530
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00521
Streptomycin biosynthesis
pspn00523
Polyketide sugar unit biosynthesis
pspn00541
O-Antigen nucleotide sugar biosynthesis
pspn01100
Metabolic pathways
pspn01110
Biosynthesis of secondary metabolites
pspn01250
Biosynthesis of nucleotide sugars
Module
pspn_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
L1F29_07325 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
L1F29_07325 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
L1F29_07325 (rfbC)
Enzymes [BR:
pspn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
L1F29_07325 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UVI31624
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All DBs
Position
1620047..1620601
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AA seq
184 aa
AA seq
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MKIIKTGLEGAIMLETDVFGDNRGYFTESYNKLRFEEAGIDCAFIQENHSFSQAAGTLRG
LHYQLAPMAQTKLVQVVTGAIYDVVVDIRQGSPSYGQWTGVILSESNNRLLLVPRGFAHG
FCTLTANTHVFYKVDQYYSKTHDRGILWSDPELGIVWPSSDLVLSDKDKLHPCLQDADNN
FHIE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcattaagaccggactggaaggcgccatcatgctggagacagacgtcttcggg
gacaatcggggttattttaccgagagctacaataaattacggtttgaggaagcgggaatc
gactgcgccttcatacaagagaatcattccttctcccaagcggcgggcacgcttcgcggc
ctccattatcagctggcacccatggcgcagacgaagctcgtacaggttgtaacaggcgcc
atatatgacgtggtcgtcgatattcgccaaggctcgccttcttatggccagtggaccggt
gtgatcctcagcgaatccaacaaccgcctgctgctcgtgcccagagggttcgcgcacggc
ttctgcaccttaacggctaacacgcatgtgttctacaaagtggaccagtattattcgaag
acgcatgaccggggcatcctgtggtcggacccggagcttggaatcgtatggccgtcctcc
gatcttgtcttatcggataaggataagctgcacccttgtcttcaggacgccgataataac
ttccatatcgagtga
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