Paenibacillus spongiae: L1F29_22090
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Entry
L1F29_22090 CDS
T09530
Symbol
cobA
Name
(GenBank) uroporphyrinogen-III C-methyltransferase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00860
Porphyrin metabolism
pspn01100
Metabolic pathways
pspn01110
Biosynthesis of secondary metabolites
pspn01120
Microbial metabolism in diverse environments
pspn01240
Biosynthesis of cofactors
Module
pspn_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
L1F29_22090 (cobA)
Enzymes [BR:
pspn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
L1F29_22090 (cobA)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
L1F29_22090 (cobA)
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Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
TrkA_N
DAHP_snth_FXD
Motif
Other DBs
NCBI-ProteinID:
UVI33718
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Position
complement(4884304..4885845)
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AA seq
513 aa
AA seq
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MGKGIVYLVGAGPGDPKLITIRGLECIRACDVIVYDRLASPRLLRELKPGAEKVYVGKLP
DRHTMKQEDINRLLVDLALQGKVVTRLKGGDPTIFGRVGEEAELLYDNGVEFEIVPGITS
AIAVPAYAGIPVTHRDLASSLSIITGHESPEKLDRSIHWDKVTNATGTLIFLMGVSKIGY
ISEQLIKHGKPPETPVALIRWGTRVEQETLVGTLETIEGIVKAANFQPPAVIVVGEVVKQ
RRKLQWAERRPLFGTRVLVTRARAQSSELADQIEALGGEACEFPVIEMREPEDSAKLEAA
LTDAESYDWLMFTSVNGVEYFFKWLKRFGIDIRRFHRARIAAVGPKTAEALENRSLTIDV
LPVIFQAEGLLDSLTDALVPGQRVLLPRGDLGRDILPRELAGKGLDPVEIDVYETVIADN
QDEDTLELLREGKIDIITFASSSSVTNLFIVLRRMGIEDPAALLKGSAIACIGPVTAETA
MNAGLEVSIQPNDSTLDALVAAVAAYRLEARLK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagggatagtctatctcgtaggagcaggtcccggcgatccgaagctgatcacg
atacgcggactcgaatgcattcgagcatgcgacgtgatcgtttatgaccgtctggccagc
ccgcgattgctccgtgagcttaagcccggcgcggagaaagtgtacgtaggcaagctgccc
gaccggcacacgatgaagcaagaggatattaaccggcttctcgtcgatttggcgctgcaa
ggtaaggttgtaacccgcttgaagggcggggatccgacaatcttcggccgcgtcggtgaa
gaggcggagctgctttatgacaatggcgtcgagtttgaaatcgttcctggcattacatcc
gcgatcgcagttcccgcatacgccggcatacctgtcacgcatcgcgatttggcttcctcg
ctgtcgattattaccggacatgaaagtccggagaagctggaccggtccattcactgggat
aaggtaacgaatgccacaggcacccttatctttctcatgggcgtatccaagatcggctat
atttcggagcagctgatcaagcatgggaaaccgccggaaactccggtagccttgatccgc
tggggaacgcgcgttgaacaagagacgctggtaggcacgctggaaacgatcgaaggcatc
gtcaaggctgccaattttcaaccgccggcggtcatcgttgtcggcgaggtcgtcaagcag
cgccggaagctgcaatgggcggagcgcagaccgttgttcgggacccgggtgctggttaca
cgcgcgagagcgcagagcagcgagctcgccgatcagatcgaagcgctcgggggagaggcc
tgtgaatttcccgtcattgagatgcgggagcccgaagacagcgccaagctggaagcggct
ctgaccgatgcggaaagctatgactggcttatgtttacgagcgtgaacggagtcgagtat
ttcttcaagtggctgaaacggttcgggatcgatatccgccggtttcatcgagcgcgtatt
gcggctgtcggtccgaagacggccgaagctttggagaatcgttcattgacgatcgacgtt
ctgccggtcatatttcaggcagagggtctgcttgacagcctgacggatgcgcttgtgccc
gggcaacgggtcctgctgccaaggggcgaccttggccgggatattctgccccgcgagctt
gccggcaaaggccttgaccctgtcgagattgacgtgtatgagactgtcattgccgataat
caggacgaggatacattggagctgcttagggaagggaagatcgatatcatcaccttcgcc
agctcgtcgtccgttacgaacctattcatcgtcctgcgccggatgggcatcgaagatccg
gctgcattgctgaagggctcggcgattgcctgcatcgggccggtcacggccgagacggcc
atgaatgccgggcttgaggtcagcatacagccgaacgactcgacgctggatgcgcttgtc
gcagcagtagcagcctatcggcttgaagcaagattgaaatag
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